Files
HealthLog/scripts
Marc-André Bombeck 4d3a02cc1a feat(security): add second-factor schema and encrypt free-text health notes at rest
Lay the account-security and data-sovereignty substrate for v1.23. No
user-facing behaviour yet — schema, crypto registry, redaction, and the
note-encryption data path only.

Schema + migrations:
- 0199 — User totp_secret_encrypted / totp_confirmed_at / mfa_enforced /
  passkey_upgrade_nudge_dismissed; Session mfa_verified_at / last_active_at;
  Passkey last_used_at. All additive, nullable / defaulted.
- 0200 — mfa_challenges (single-use step-up ticket; only the ticket hash is
  stored, so no session or token is ever minted before the second factor),
  mfa_recovery_codes (Argon2id at rest), webauthn_mfa_credentials (second-factor
  keys, kept separate from passkeys, which remain the passwordless-primary set).
- 0201 — mood_entries.note_encrypted + measurements.notes_encrypted (BYTEA),
  matching the existing free-text encrypted-note convention.

Free-text health notes:
- New writes encrypt the mood / measurement note into the *_encrypted column and
  null the legacy plaintext column; reads prefer the ciphertext and fall back to
  plaintext only for not-yet-migrated rows, via a single read/write helper.
- A boot-time job migrates existing plaintext rows in an idempotent,
  transactional, fail-closed pass (encrypt, then null the plaintext, per row in
  one transaction; safe to re-run; a row with content is never left both-null).
- The legacy plaintext columns are kept this release and dropped in a follow-up
  once the backfill reports zero remaining rows — the same boundary the
  key-rotation playbook uses before dropping a legacy key.

Crypto coverage:
- Register the three new encrypted columns and wire them into the key-rotation
  script so a rotation never orphans them.
- Extend the observability and log redaction denylists so TOTP secrets, MFA /
  recovery / backup codes, and export passphrases never reach a wide event.
2026-06-27 19:33:10 +02:00
..
2026-05-14 23:49:32 +02:00
2026-05-16 09:28:40 +02:00
2026-05-16 14:19:57 +02:00

scripts/

One-shot operator and build scripts. These are not part of the running application — they are run by hand during a deploy, a backfill, or a release, or wired into CI. Recurring work belongs on pg-boss (src/lib/jobs/), not here.

How to run them

pnpm dlx tsx scripts/<file>.ts

Use pnpm dlx tsx, not bare pnpm tsx. The production standalone image strips tsx, so the bare invocation fails inside the container. scripts/ is excluded from the project typecheck.

What lives here

  • generate-openapi.ts — emits docs/api/openapi.yaml from the registered Zod schemas (pnpm openapi:generate).
  • check-openapi.ts — compares a freshly generated spec against the committed YAML; CI fails on drift (pnpm openapi:check).
  • check-env.ts — pre-deploy env-var sanity check against env-manifest.json (pnpm check-env); wired into CI.
  • assert-deploy.ts — post-deploy /api/version assertion.
  • rotate-encryption-key.ts — AES-256-GCM key rotation; see docs/ops/encryption-key-rotation.md.
  • restore-backup.ts — restore an off-host AES-GCM backup from an S3-compatible bucket.
  • repair-intake-anomalies.ts — repair historic medication-ledger defects (duplicate dose-slot rows, implausible taken_at); dry-run by default, see docs/ops/intake-repair.md.
  • backfill-rollups.ts, drain-per-sample-cumulative.ts, backfill-mood-note-column.ts — historical data backfills (note: the boot-time rollup-full-backfill queue handles new accounts automatically; the CLI is the manual fallback).
  • seed-demo.ts + seed-demo-v15.sql — populate a demo tenant.
  • test-notifications.ts — exercise the notification dispatcher + reminder check.
  • fetch-geolite2.sh — download the MaxMind GeoLite2 MMDBs (needs a licence key) before docker build.
  • install-hooks.sh — install the local git hooks.
  • generate-sw-version.mjs, print-bundle-report.mjs — service-worker version stamp and bundle-size report.
  • i18n/ — locale tooling; __tests__/ — tests for the scripts above.

Conventions

See ../CLAUDE.md "Tests and commands" + "Self-hosting gotchas". Operator runbooks that drive these scripts live in ../docs/ops/.