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Marc-André Bombeck 408ae35b7c fix(migrations): retry a marked migration that lost a deadlock

A marked migration's DO block holds the locks it takes until it commits,
so an app transaction taking two of its tables in the other order can
deadlock with it. The block then rolled back whole, exactly as on a lock
timeout, so the boot retries 40P01 for marked migrations as it does 55P03.
Corrects 0415's note that the drops hold their lock for an instant.

2026-10-20 16:06:10 +02:00

__tests__

fix(migrations): retry a marked migration that lost a deadlock

2026-10-20 16:06:10 +02:00

i18n

chore(release): v1.4.25

2026-05-14 23:49:32 +02:00

assert-deploy.ts

chore: scrub instance details and personal data from committed artefacts

2026-06-10 11:00:26 +02:00

audit-column-readers.ts

fix(audit): teach the column sweep to tell a filter from a write

2026-09-03 05:09:00 +02:00

backfill-mood-note-column.ts

fix(coach): keep updatedAt through storage-only rewrites

2026-10-05 12:40:55 +02:00

backfill-rollups.ts

style: apply prettier across the tree

2026-06-19 22:20:31 +02:00

check-bundle-budget.mjs

build: budget the lazy message catalogs per catalog, not in the aggregate

2026-10-20 00:30:20 +02:00

check-e2e-skipped-specs.mjs

test(e2e): run the delegated-writes journey and fail on silent skips

2026-09-27 04:48:08 +02:00

check-env.ts

style: apply prettier across the tree

2026-06-19 22:20:31 +02:00

check-openapi.ts

chore(release): v1.4.49 — audit-backlog closure + server reminder suppression + diagnostic endpoint + analytics cold-path fix

2026-05-23 12:51:41 +02:00

cleanup-apple-health-phantom-meds.ts

chore(scripts): apply prettier to the phantom-med cleanup script

2026-07-24 23:18:26 +02:00

compare-correlation-findings.ts

fix(insights): correlate residuals, not the calendar

2026-10-08 08:32:15 +02:00

convert-noncanonical-measurement-units.ts

test(measurements): cover the unit transform, MCP unit hardening, and a display guard

2026-07-25 00:21:36 +02:00

decrypt-export.ts

feat(export): offer a passphrase-encrypted archive

2026-06-27 20:27:07 +02:00

diagnose-apple-health-meds.ts

chore(scripts): add read-only diagnose + guarded cleanup for phantom Apple-Health mirror meds

2026-07-24 23:02:03 +02:00

diagnose-cycle-state.ts

chore(cycle): add a read-only report for records the module stopped reading

2026-08-07 15:52:59 +02:00

diagnose-implausible-measurements.ts

fix(sync): enforce the plausibility domain on every provider write path

2026-08-07 22:19:43 +02:00

diagnose-manual-sleep-hours.ts

fix(measurements): store a hand-entered night in the unit the field asks for

2026-08-07 14:30:10 +02:00

diagnose-noncanonical-measurement-units.ts

test(measurements): cover the unit transform, MCP unit hardening, and a display guard

2026-07-25 00:21:36 +02:00

disable-mfa.ts

fix(security): revoke other sessions when the second factor is removed

2026-06-27 21:50:16 +02:00

drain-per-sample-cumulative.ts

chore(release): v1.4.38

2026-05-17 19:07:03 +02:00

env-manifest.json

feat(observability): log heap samples and a one-time pressure report

2026-10-19 16:00:53 +02:00

fetch-geolite2.sh

chore(release): v1.4.28.1

2026-05-16 09:28:40 +02:00

generate-i18n-boot.mjs

feat(i18n): add Dutch as an eighth end-to-end locale

2026-10-19 11:06:55 +02:00

generate-openapi.ts

refactor(openapi,queries): feature-located registries behind thin indexes

2026-06-11 00:10:00 +02:00

generate-sw-version.mjs

chore: strip planning tags from comments and enable the rule

2026-10-20 09:08:40 +02:00

i18n-key-tool.mjs

feat(i18n): add Dutch as an eighth end-to-end locale

2026-10-19 11:06:55 +02:00

import-documents.mjs

Add the sick note document kind

2026-10-03 21:40:01 +02:00

install-hooks.sh

chore(release): v1.4.31

2026-05-16 14:19:57 +02:00

measure-description-lengths.mjs

test(e2e): measure that Settings and Admin read as one surface

2026-08-07 22:16:31 +02:00

migrate-demo-edge01.README.md

refactor(medications): drop the compliance rollup table that nothing reads

2026-10-20 13:01:45 +02:00

migrate-demo-edge01.sh

refactor(medications): drop the compliance rollup table that nothing reads

2026-10-20 13:01:45 +02:00

migrate-deploy.mjs

fix(migrations): retry a marked migration that lost a deadlock

2026-10-20 16:06:10 +02:00

pending-migrations.mjs

feat(ops): log pending migrations before migrate deploy and document a dump before every update

2026-10-15 15:12:57 +02:00

prepare.mjs

fix(ci): harden test determinism and dependencies

2026-07-21 00:36:40 +02:00

promote-digest.ts

style: apply prettier across the tree

2026-06-19 22:20:31 +02:00

README.md

feat(ops): repair walking distances stored a thousand times too small

2026-09-09 22:45:13 +02:00

repair-apple-health-distance.ts

fix(ops): stop the distance dry run promising work it will refuse

2026-09-10 01:30:26 +02:00

repair-google-health-sleep.ts

chore(release): v1.28.18 — Google Health sleep reads its true total

2026-07-10 13:08:55 +02:00

repair-intake-anomalies.ts

refactor(medications): drop the compliance rollup table that nothing reads

2026-10-20 13:01:45 +02:00

reset-password.mjs

fix(01-08): revoke credentials atomically on password reset

2026-07-29 13:55:11 +02:00

restore-backup.ts

fix(backup): bind new off-host objects to their key and account, and cap what an uploaded backup may inflate to

2026-09-26 20:18:55 +02:00

rotate-encryption-key.ts

feat(insights): seal the cached AI insights payload at rest

2026-10-20 07:30:00 +02:00

run-coach-eval.ts

test(coach): put the dialog scenarios to a real model nightly

2026-09-27 13:07:25 +02:00

seed-demo-apps01.sql

chore(release): v1.15.15 — one warm, motivating assistant voice

2026-06-07 21:49:27 +02:00

seed-demo-extend-1y.sql

chore(cleanup): drop orphaned doctor-report PDF helper after export-page removal

2026-06-06 23:30:39 +02:00

seed-demo-meds-apps01.sql

chore(release): v1.15.15 — one warm, motivating assistant voice

2026-06-07 21:49:27 +02:00

seed-demo-scores-1y.sql

chore(cleanup): drop orphaned doctor-report PDF helper after export-page removal

2026-06-06 23:30:39 +02:00

seed-demo-v15.sql

refactor(medications): drop the compliance rollup table that nothing reads

2026-10-20 13:01:45 +02:00

seed-demo.ts

fix(demo): seal the baked insights cache and carry it across a migration

2026-10-20 09:46:48 +02:00

seed-large-account.ts

chore(scripts): add a seed for an account the size of a multi-year import

2026-09-25 00:32:10 +02:00

split-description.mjs

feat(i18n): add Dutch as an eighth end-to-end locale

2026-10-19 11:06:55 +02:00

stage-tesseract-assets.mjs

build: name the OCR language packages literally in the staging script

2026-09-26 15:45:28 +02:00

strip-planning-tags.mjs

chore(lint): add a sweep and a rule for planning tags in comments

2026-10-20 08:52:23 +02:00

synthetic-journey.mjs

test(ops): prove the journey's redactor on a key-shaped body

2026-09-10 01:26:40 +02:00

test-notifications.ts

fix: harden pnpm supply chain and runtime image (#572 )

2026-07-21 04:36:53 +02:00

v1341-audit-ledger-check.mjs

style: satisfy v1.34.1 format gate

2026-07-29 15:59:12 +02:00

v1341-performance-baseline.mjs

style: satisfy v1.34.1 format gate

2026-07-29 15:59:12 +02:00

verify-v137-adversarial.ts

fix: reconcile sharing migrations

2026-08-07 06:21:55 +02:00

README.md

`scripts/`

One-shot operator and build scripts. These are not part of the running application — they are run by hand during a deploy, a backfill, or a release, or wired into CI. Recurring work belongs on pg-boss (src/lib/jobs/), not here.

How to run them

From a source checkout:

pnpm dlx tsx scripts/<file>.ts

The production image intentionally removes npm, pnpm, and Corepack. Only container-safe scripts named by an operator runbook use its pinned healthlog-tsx launcher; scripts that import the full application dependency graph must run from a source checkout. scripts/ is excluded from the project typecheck.

What lives here

generate-openapi.ts — emits docs/api/openapi.yaml from the registered Zod schemas (pnpm openapi:generate).
check-openapi.ts — compares a freshly generated spec against the committed YAML; CI fails on drift (pnpm openapi:check).
check-env.ts — pre-deploy env-var sanity check against env-manifest.json (pnpm check-env); wired into CI.
assert-deploy.ts — post-deploy /api/version assertion.
rotate-encryption-key.ts — AES-256-GCM key rotation; see docs/ops/encryption-key-rotation.md.
restore-backup.ts — restore an off-host AES-GCM backup from an S3-compatible bucket.
repair-apple-health-distance.ts — repair walking-distance rows the export.zip import stored 1000x too small; dry-run by default, see docs/ops/apple-health-distance-repair.md.
repair-intake-anomalies.ts — repair historic medication-ledger defects (duplicate dose-slot rows, implausible taken_at); dry-run by default, see docs/ops/intake-repair.md.
backfill-rollups.ts, drain-per-sample-cumulative.ts, backfill-mood-note-column.ts — historical data backfills (note: the boot-time rollup-full-backfill queue handles new accounts automatically; the CLI is the manual fallback).
seed-demo.ts + seed-demo-v15.sql — populate a demo tenant.
test-notifications.ts — exercise the notification dispatcher + reminder check.
fetch-geolite2.sh — download the MaxMind GeoLite2 MMDBs (needs a licence key) before docker build.
install-hooks.sh — install the local git hooks.
generate-sw-version.mjs, print-bundle-report.mjs — service-worker version stamp and bundle-size report.
i18n/ — locale tooling; __tests__/ — tests for the scripts above.

Conventions

See ../CLAUDE.md "Tests and commands" + "Self-hosting gotchas". Operator runbooks that drive these scripts live in ../docs/ops/.