Commit Graph
7318 Commits
Author SHA1 Message Date
Marc-André Bombeck d6571c4e9c feat(symptoms): add person-defined symptoms and timestamped occurrences
A symptom of one's own ("aura", "headache") is a definition with an
encrypted name and an icon from the cycle custom-symptom allowlist; each
occurrence carries a time, a 0-10 intensity (the pain score's scale), an
optional encrypted note and an optional link to one of the record's open
illness episodes. Both ride the illness module: every route answers
illness.disabled when it is off.

- Migration 0369 (idempotent): symptom_definitions and symptom_events,
  intensity CHECK 0-10, episode link ON DELETE SET NULL.
- /api/symptoms/definitions{,/[id]} and /api/symptoms/events{,/[id]}:
  eight active definitions per record (a hidden one frees its slot,
  showing it again re-checks), hide or purge, events create/list/edit/
  delete, a new link must name an open episode of the same record
  (422 symptoms.episode.notOpen). Error group symptoms.*.
- Sharing: reads at READ, logging an occurrence at WRITE, defining and
  editing at MANAGE; C1/C3/C4 audit details; frozen lists, the handler
  matrix and the activity verbs updated.
- Both encrypted columns registered and rotated; both models in the wipe
  plan; both carried at both backup ends with occurrences nested in their
  definition, plaintext in a portable file and ciphertext in a recovery
  file, and a link to an episode the file lacks dropped and named
  (symptomEpisodeReference).
- OpenAPI regenerated.
2026-10-03 21:13:45 +02:00
Marc-André Bombeck 7cd323499e Merge pull request #1106 from MBombeck/feat/v140-fixes
Workout insight cap, marker unit lock, natural durations, charts that include today, and display fixes
2026-10-03 20:32:09 +02:00
Marc-André Bombeck cd3c0b7de2 Merge remote-tracking branch 'origin/main' into feat/v140-fixes
# Conflicts:
#	docs/api/openapi.yaml
2026-10-03 20:06:16 +02:00
Marc-André Bombeck af1a6e0b14 Merge pull request #1104 from MBombeck/feat/key-backup-and-transport
Back up the encryption key, refuse a key that cannot open the data, and stop sign-ins that cannot keep their cookie
2026-10-03 20:05:58 +02:00
Marc-André Bombeck 1c2822a67b chore(bundle): re-base the client budget for v1.40 2026-10-03 19:43:40 +02:00
Marc-André Bombeck e132110fcd chore(bundle): re-base the client budget for v1.40 2026-10-03 19:43:39 +02:00
Marc-André Bombeck 816eabb3c3 Merge remote-tracking branch 'origin/main' into feat/v140-fixes
# Conflicts:
#	docs/api/openapi.yaml
2026-10-03 19:22:56 +02:00
Marc-André Bombeck 37793298a8 Merge remote-tracking branch 'origin/main' into feat/key-backup-and-transport
# Conflicts:
#	docs/api/openapi.yaml
2026-10-03 19:22:01 +02:00
Marc-André Bombeck 02b6f06521 Merge pull request #1103 from MBombeck/feat/document-ai-runs
Read documents and lab scans in the background
2026-10-03 19:21:43 +02:00
Marc-André Bombeck d753621bd1 Merge pull request #1105 from MBombeck/fix/lab-list-columns
Keep lab list columns aligned for readings without a range
2026-10-03 19:07:43 +02:00
Marc-André Bombeck dcf3b18c91 Merge pull request #1099 from MBombeck/docs/readme-thanks
Update the thanks section
2026-10-03 18:59:01 +02:00
Marc-André Bombeck f3ccc809a8 Merge remote-tracking branch 'origin/main' into wip/v140-E 2026-10-03 18:56:39 +02:00
Marc-André Bombeck c3525cd02f fix(labs): stop the biomarker backfill on its job budget
The integration-backfill drain handed its job budget only to the
Google Health backfill. The lab-biomarker backfill now takes it too,
asks it before each analyte group and, once it says stop, throws
without touching the rest. Finished groups are linked and drop out of
the next scan, so the retry resumes where the pass stopped instead of
running on past the job's expiry beside its own retry.
2026-10-03 18:53:28 +02:00
Marc-André Bombeck 9455b64375 feat(dashboard): send the glucose card in the owner's glucose unit
/api/dashboard/summary sent the glucose card's value in mg/dL with
unit null and a unitKey that reads mg/dL, so a reader on mmol/L saw
the mg/dL number. The card now carries latestValue, secondaryValue
and sparkline in the record owner's glucose unit and names it in
unit, the field that wins over unitKey, as the sleep card already
does. Applied after the summary cache read, so a unit change shows
on the next request.
2026-10-03 18:50:35 +02:00
Marc-André Bombeck facae940b9 Merge remote-tracking branch 'origin/main' into feat/key-backup-and-transport
# Conflicts:
#	docs/api/openapi.yaml
2026-10-03 18:49:04 +02:00
Marc-André Bombeck a01554bd53 fix(dashboard): give the key backup link a 44 px touch target 2026-10-03 18:48:58 +02:00
Marc-André Bombeck cfddf097c7 fix(documents): file an undated document under the reader's upload day
The archive grouped a document without a stated date by the UTC day
of its upload, so an upload late on the last evening of a month west
of UTC opened next month's section (and early on the first morning
east of UTC, last month's). The upload day is now read in the
profile time zone for the month sections and the year filter.
2026-10-03 18:47:05 +02:00
Marc-André Bombeck 9ecdda6358 fix(dates): show a stated calendar date as that date east of UTC+12
Day keys anchored at noon UTC went through the zone-aware
dateShortSmart, which shows them as the next day in UTC+12..+14. A
dateShortSmartCalendar formatter reads the key in UTC with the same
year rule, and the predictions panel, the illness timeline, the
intraday pulse day label, the nutrient chart and the coach result
chart use it. The lab chart dates a date-only reading by its calendar
date and a timed one in the reader's zone, as the lab lists do. The
timezone formatter guard now fails on a noon anchor handed to a
zone-aware formatter.
2026-10-03 18:44:06 +02:00
Marc-André Bombeck 20470d99f4 Merge remote-tracking branch 'origin/main' into feat/document-ai-runs
# Conflicts:
#	docs/api/openapi.yaml
2026-10-03 18:41:55 +02:00
Marc-André Bombeck 358ef23239 fix(clinician): write the shared view's numbers in the owner's locale
The clinician view rounded numbers and printed them bare, so a German
record showed 24.5 where every other surface shows 24,5. Its number
formatter now goes through the locale formatter it already builds,
at most two decimals.
2026-10-03 18:39:03 +02:00
Marc-André Bombeck 5c300a8d9c fix(labs): keep the range bar and trend in their columns when a reading has no range
The range badge renders nothing for a reading without a reference range, so
that row had four cells instead of five and the range bar and the trend
moved one column to the left. The badge now sits in a cell of its own. The
chevron is hidden from lg up, where the row's hover already says it opens;
a phone keeps it.
2026-10-03 18:38:31 +02:00
Marc-André Bombeck fdd34f2c5e fix(charts): keep a chart's window open to the end of today
A chart showing the last N days fixed its window end at the mount
instant. The query key kept that bound, so the refetch after a new
reading asked for the same old window and the reading stayed hidden
until the range tab was switched. The window now ends at the end of
the current day in the profile time zone (openEndedFetchWindow, keyed
on the day): every reading saved today falls inside it, the cache key
stays the same all day, and it moves on after midnight. The dashboard
batch shares the end-of-day helper.

Refs #1102
2026-10-03 18:35:49 +02:00
Marc-André Bombeck 51e2d68a88 i18n(measurements): say how a duration entry was read
Refs #1101
2026-10-03 18:35:26 +02:00
Marc-André Bombeck 313d8491de feat(measurements): read a sleep duration written as 7:30 or 7h 30m
The sleep field asked for decimal hours only. A shared parser
(parse-duration.ts) now reads a bare number with point or comma,
H:MM, and hours and minutes with unit words (7h, 7h30, 7 h 30 min,
45m), answers in the field's unit, and refuses a negative, unknown or
longer-than-a-day entry. The form shows how the entry was read under
the field and puts a refusal on the field itself. The stored value and
the API are unchanged.

Refs #1101
2026-10-03 18:28:39 +02:00
Marc-André Bombeck d805ccf28b Merge pull request #1100 from MBombeck/ci/trivy-braces
Ignore the braces advisory until a fix is published
2026-10-03 18:28:24 +02:00
Marc-André Bombeck 7b51edcebe Merge pull request #1096 from BernhardBuckel/fix/lab-unit-mismatch
fix(labs): refuse a reading whose unit differs from its marker's
2026-10-03 18:28:20 +02:00
Marc-André Bombeck b04b1f2995 fix(encryption): sample several stored values before declaring a key mismatch
The boot check decided on the first value it found under a key id, so
one damaged or foreign-sealed row could take a correctly keyed server
down with 503 on every request. The probe now samples up to five
values, one per column first. One value that opens clears the key; a
mismatch needs at least two values and none opening. A single value
that does not open is inconclusive: the server keeps serving, writes no
canary, logs a warning and probes again at the next start.

Integration setup truncates encryption_key_canaries between tests.
2026-10-03 18:27:28 +02:00
Marc-André Bombeck 3a35dbcf37 i18n(labs): say why a biomarker's unit cannot change once it has readings 2026-10-03 18:22:55 +02:00
Marc-André Bombeck ced17569bf i18n: login notice for a page whose sign-in cookie cannot stick
Adds auth.insecureTransport in all seven locales.
2026-10-03 18:21:23 +02:00
Marc-André Bombeck b100c73a62 fix(auth): refuse a sign-in over plain http before it spends a factor (#1097)
A server that issues Secure session cookies cannot sign anyone in on a
plain http:// page: the browser drops the cookie. The login request was
still verified, the MFA ticket minted and then claimed, and the next
attempt answered "Invalid or expired challenge".

The web client now sends an optional clientTransport on the browser
sign-in requests (password login, passkey start, both MFA completions).
When the server issues Secure cookies and the page is plain http on a
non-loopback host, the request is refused with 409
auth.session.insecure_transport before the password is checked, a
ticket is minted or claimed, a code is spent, or a passkey challenge is
issued. A request without the field is never refused. The SSO start
takes client_proto/client_host and sends such a page back to the login
page instead of to the provider.

GET /api/auth/registration-status publishes sessionCookieSecure, and the
login page shows the reason with both fixes and disables the sign-in
controls before anything is sent; on localhost it shows a note only.
SESSION_COOKIE_SECURE keeps its meaning; the header heuristic log line
stays.
2026-10-03 18:21:19 +02:00
Marc-André Bombeck 89540a999b i18n(documents): say when a read continues in the background
Seven locales for the background-run copy: the calm line while a document
read or a lab scan runs in the worker, the hint when no worker has picked it
up, and the two failures only a background run can produce.
2026-10-03 18:20:59 +02:00
Marc-André Bombeck dd7636e147 feat(labs): refuse a biomarker unit change while readings are linked
Readers label every linked reading with the marker's unit, so changing
it relabelled stored numbers without converting them. PUT
/api/biomarkers/{id} now answers 422 biomarkers.unit.locked with
meta.readingCount when the unit differs and any reading (tombstoned
ones included) is linked. The marker editor says so under the unit
field.
2026-10-03 18:19:50 +02:00
Marc-André Bombeck 0acf3da575 feat(documents): read documents and lab scans in the background
"Read with AI" and the lab scan used to run their model calls inside the
request. At the default response time a read of three calls outlasted the
100 s a proxy in front of the server commonly allows, and the person saw a
cut connection for a read the server was still doing.

Both now run as a background run (`DocumentAiRun`, migration 0366):

- `POST /api/documents/inbound/{id}/index` with `Prefer: respond-async`
  answers 202 with a run id once every quick refusal has passed. Without
  the header it answers exactly as before, which the iPhone app relies on.
  A second request while a read of the same document is queued or running
  attaches to that run.
- `POST /api/labs/ocr/extract` always answers 202. Only the web client
  calls it.
- `GET /api/ai-runs/{id}` serves the run: the same body the synchronous
  route answers with, or the failure code and status it would have given.
  Scoped to the caller; another account's run is a 404.

The worker (`document-ai-run`, a long queue with a one-hour expiry, one
job per run under `lockedPass`) claims the run, asks the capability again
for the record and re-checks the wire for the provider it picks, sets the
run's deadline from the person's AI response time and refuses a read that
cannot fit the job's expiry. Sync route and worker run one body per kind,
so the two paths cannot drift. Budget is reserved at enqueue and settled
once by whoever ends the run.

Input and result are sealed with labelled AES-256-GCM, registered for key
rotation; the input is dropped when the run ends. A five-minute reaper
fails a run no worker took within fifteen minutes (and hands its
reservation back), fails a run past its deadline, and deletes a finished
run after an hour. Runs are outside backups and inside the data wipe.

The web client polls through the query-key factory and says, calmly, that
the read continues in the background, and when no worker has picked it up.
2026-10-03 18:18:56 +02:00
Marc-André Bombeck 911e642c24 i18n: encryption key backup step, refusal page and dashboard banner
Adds admin.keyBackup, admin.keyMismatch and dashboard.keyBackupBanner in
all seven locales.
2026-10-03 18:06:33 +02:00
Marc-André Bombeck 308470f229 feat(encryption): back up the key, and refuse to serve when it cannot open the database
Every configured key id now has a canary in encryption_key_canaries,
checked at boot. A key that cannot open its canary, or existing data
written before the canary existed, puts the process in a refusal state:
every API route answers 503 encryption.key_mismatch, /api/health reports
reason encryption_key_mismatch, the pages render one explanation, and
neither the queue producer nor the worker starts. The process stays up
so the reason is visible instead of hiding in a crash loop.

The admin Encryption page gains a "Back up your encryption key" step:
key id and fingerprint (never the key), where the key lives per
platform, a check of a pasted copy that is compared and discarded, and
a confirmation bound to the active key id and fingerprint. The overview
gets a tile and admins get a dashboard banner while it is due.

HEALTHLOG_PLATFORM picks the platform the step opens on. Adds the
TrueNAS self-hosting page and key backup sections in the docs.
2026-10-03 18:06:28 +02:00
Marc-André Bombeck 7022b698e7 fix(ai): forget the remembered working provider when the chain is saved
The in-memory memo of the last provider that answered reorders the
chain for up to an hour. Saving a new chain now drops it for that
account, so a provider the person removed or disabled no longer leads
the chain they just arranged.
2026-10-03 18:04:09 +02:00
Marc-André Bombeck 916f918674 feat(workouts): save an edited resubmit of a hand-entered workout
The manual form sends one manual: id per opening and resends it after
an edit. The batch route now treats a MANUAL entry with a manual: id
as an overwrite, the way stats: measurements are: the stored row takes
the new values and the entry reports "updated", or "duplicate" when
nothing changed. Records keyed on the workout are removed under the
personal-records lock and re-derived. Every other id stays
first-write-wins. The status enum gains "updated".
2026-10-03 17:59:20 +02:00
Marc-André Bombeck 87fa2f85fa Merge branch 'main' into ci/trivy-braces 2026-10-03 17:57:51 +02:00
Marc-André Bombeck 3cb98f92e9 Merge branch 'main' into docs/readme-thanks 2026-10-03 17:57:50 +02:00
Marc-André Bombeck 6bb65824bf fix(workouts): serialise record detection with a workout delete
The workout-slot detection reads the best workout and writes its record
inside one transaction under a per-user advisory lock, and the workout
DELETE takes the same lock before removing records and the workout. A
delete can no longer land between the read and the write and leave a
record for a workout that is gone.

The DELETE's match for a legacy record without an external id is scoped
to the slots of the deleted workout's sport, so a record another sport
set at the same instant stays.
2026-10-03 17:54:04 +02:00
Marc-André Bombeck ab081d2a85 fix(workouts): keep a deleted workout's insight slot spent
The insight claim row is now the daily-cap ledger. Its workout_id is
nullable with ON DELETE SET NULL (migration 0367), so deleting a workout
no longer frees the day's slot. The cap counts claims that reached the
provider plus live leases, and drops the separate count of insight rows.
A daily workout-insight-claim-cleanup queue removes claim rows untouched
for seven days.
2026-10-03 17:53:36 +02:00
Marc-André Bombeck ed94e56c5e Merge branch 'main' into fix/lab-unit-mismatch 2026-10-03 17:51:46 +02:00
Marc-André Bombeck b9867caeea Merge pull request #1098 from MBombeck/fix/backup-round-trip-tombstone-age
Keep the backup round-trip tombstone inside the retention window
2026-10-03 17:51:43 +02:00
Marc-André Bombeck 1d86bb8d6d i18n(labs): unit mismatch strings for es, fr, it, ko and pl 2026-10-03 17:45:05 +02:00
Marc-André Bombeck 296ca5d2dc ci(trivy): ignore the braces advisory until a fix is published
braces is reached only by development tooling and never ships in the
production image; no patched version exists yet.
2026-10-03 17:29:51 +02:00
Marc-André Bombeck 1dab2687ab docs(readme): thank contributors, reporters and supporters by what they gave 2026-10-03 17:29:34 +02:00
Marc-André Bombeck 86a6e81fc1 test(backup): keep the tombstone fixture inside the retention window
The round-trip fixture deleted its measurement on a fixed date. The restore
drops a measurement tombstone older than TOMBSTONE_RETENTION_DAYS (75) on
purpose, so on 2026-10-03 the fixture aged out and the suite failed on main
and on every open branch. The deletion is now ten days before the run.
2026-10-03 17:28:50 +02:00
BernhardBuckel d3916036c2 fix(labs): refuse a reading whose unit differs from its marker's
A numeric lab reading was stored with its value as received and the marker's
unit stamped on it, so 5.6 mmol/L against a marker kept in mg/dL became
5.6 mg/dL and read as far below range. Both the manual/API write and the
scan commit did this; nothing compared the two units.

- POST /api/labs returns 422 labs.unit.mismatch, with the marker's unit and
  the reading's unit in meta, and writes nothing. The unit is compared only
  when one was sent: on the biomarkerId path it may be omitted, and the
  marker's unit is then the stated one. A qualitative reading has no unit.
- The scan commit skips such a row with reason unit_mismatch, so the outcome
  reads partial or failed instead of a clean save, and the toast names the
  analytes concerned rather than saying "duplicates".
- The extract response carries the matched marker's unit. The review screen
  shows a calm badge on a row in another unit, starts it unticked like a
  duplicate, and treats it as a blocking error on the unit field if it is
  ticked anyway.
- A small lab-specific normaliser forgives spelling only: spacing, the micro
  prefix, the case of the litre, and a unit printed in capitals for a short
  list where capitals cannot mean another unit. Case is otherwise significant,
  so mIU/L and MIU/L, or g/L and G/L, are never merged.

The document-commit path already refuses a mismatch and is left as it is.
Readings stored wrongly before this cannot be identified, because the
original unit was never kept; they are not touched.

Adds EN and DE strings; the other locales are left to the maintainers. The
OpenAPI spec and the error-code catalogue carry the new code.

Fixes #1094
2026-10-03 15:44:51 +02:00
Marc-André Bombeck 556bd6d6cd Merge pull request #1093 from MBombeck/release/v1.39.9
Release v1.39.9
v1.39.9
2026-10-03 00:57:24 +02:00
Marc-André Bombeck e42b3f331f chore(release): v1.39.9 — log a workout by hand, a page for body fat, and the AI response time everywhere 2026-10-03 00:35:27 +02:00