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Marc-André Bombeck
b4bc039d16
The link service gains medication and lab result sources and the five new
tables, each readable from both ends. POST/DELETE /api/medications/{id}/links
and /api/labs/{id}/links replace their 501 stubs; the visit links route also
files medications and doses, the dose links route its visit. A scan commit
with a documentId files each written result against its report.
GET on a lab result, visit, document, condition, medication and dose now
carries related[]: stored links, the condition a result shares a visit with,
and the medication whose efficacy target is the result's marker, each with
its web path. A kind is listed only when its module is on and the caller's
grant covers its section. relation-matrix.test.ts holds every one of the
fifteen pairs to a table, a reader or a written exception.
docs/ — internal reference + operator playbooks
The user-facing documentation lives at https://docs.healthlog.dev — that's the canonical surface for self-hosting guides, integration walkthroughs, AI-provider setup, and the doctor-report workflow.
The files in this directory are the internal operator playbooks, audit notes, and machine-readable specs that ship alongside the source:
api/— the OpenAPI 3.1 spec for the native-client subset (iOS DTO codegen target). Seeapi/README.mdfor the preview commands. Also home to the MCP-server contract:api/mcp-capabilities.md(tools, resources, prompts, write model) andapi/mcp-skills.md(building a connector / skill).ops/— operator runbooks: deploy, backup / restore, encryption-key rotation, password reset and account recovery, env checks, TLS pinning, data repair. These are what an operator reaches for during an incident.self-hosting/— horizontal-scaling notes (HEALTHLOG_PROCESS_TYPE=web|worker|all) and the deploy-pipeline recipe. Routine install steps stay ondocs.healthlog.dev. Includesself-hosting/mcp.md— enabling the off-by-default MCP connector and pointing Claude.ai / ChatGPT / Claude Desktop at it, andself-hosting/sso.md— OIDC SSO login: IdP setup, the identity-pinning security model,OIDC_ONLYconsequences, and the break-glass runbook. Alsoself-hosting/geolite2.md— bringing your own offline GeoLite2 databases viaGEOLITE2_DIRinstead of sending login IPs to a third-party lookup. Andself-hosting/account-sharing.md— letting one account on the instance open another's health record: the three access levels, the eight sections a grant can be narrowed to, managed profiles for somebody with no login and the guardians who look after them, what revocation does and does not undo, and which trust properties of the instance are unchanged by any of it. Andself-hosting/support.md— reporting a problem: error ids, the support info every account can copy, the operator's redacted support report, and finding an error in the admin log.using/— notes on using the app that sit close to the code.using/search.mdcovers the command palette's record search: opening it, what it finds, how matching works, and its limits on very large and shared records.migration/— migration notes. Currently only v1.3 to v1.4; later releases are covered byCHANGELOG.mdand https://docs.healthlog.dev.integrations/— per-integration reference (Withings, Fitbit, Google Health, WHOOP, Apple Health, AI providers, data import).adr/— architecture decision records.security/— threat-model notes.diagrams/— architecture diagrams rendered through docs.healthlog.dev.releases/— release imagery.apple-store-connect-checklist.md— the iOS submission gate.codex-protocol-spec.md— Codex / ChatGPT OAuth protocol reverse-engineering notes.ui-guidelines.md— UI / a11y house style.
If you're a self-hoster looking to spin up an instance, start at https://docs.healthlog.dev or jump to the Quick Start in the project README.