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Marc-André BombeckandClaude Opus 4.8
e984ada5f1
Promote the reproductive HealthKit category types out of the Apple-Health-import privacy-hold list and route them into cycle day-logs instead of measurements, and surface cycle data on the three export surfaces. Import promotion: - A new HealthKit -> cycle mapping module is the single source of truth for how MenstrualFlow, IntermenstrualBleeding, CervicalMucusQuality, OvulationTestResult, SexualActivity, PregnancyTestResult, ProgesteroneTestResult, Contraceptive and the symptom category types fold into CycleDayLog fields / seeded symptom keys. The XML importer accumulates same-day reproductive samples and writes one canonical day-log per day with source APPLE_HEALTH and a synthetic per-day externalId for idempotent re-import. The fold is gated on cycle tracking being enabled, so a non-cycle export never provisions cycle rows. A contraceptive method nudges the profile goal toward avoiding pregnancy only when the goal is still on its default. Basal body temperature stays a measurement and mirrors onto the day-log. Pregnancy/Lactation status and the pregnancy-bleeding types stay deferred; the cycle awareness types remain server-derived. Export: - FHIR emits LMP (LOINC 8665-2), average cycle length (64700-8), period length (64698-4) and the current phase as opt-in reproductive-health observations grouped into their own document section. - The doctor PDF gains an opt-in cycle section (recent cycles, average length and variability, current phase), privacy-default off like mood. - The full-backup export, the weekly backup worker and the off-host DR snapshot include the cycle tables, and the admin restore re-creates them; the day-log note round-trips as ciphertext and is never decrypted onto a report surface. Mapping table documented in docs/api/cycle-healthkit-mapping.md. Adds unit + integration coverage for the mapping, the import routing, the FHIR observations and the backup round-trip. OpenAPI regenerated. Six-locale strings added. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
docs/ — internal reference + operator playbooks
The user-facing documentation lives at https://docs.healthlog.dev — that's the canonical surface for self-hosting guides, integration walkthroughs, AI-provider setup, and the doctor-report workflow.
The files in this directory are the internal operator playbooks, audit notes, and machine-readable specs that ship alongside the source:
api/— the OpenAPI 3.1 spec for the native-client subset (iOS DTO codegen target). Seeapi/README.mdfor the preview commands.ops/— backup / restore + encryption-key-rotation playbooks. These are the runbooks an operator reaches for during an incident.self-hosting/— horizontal-scaling notes (HEALTHLOG_PROCESS_TYPE=web|worker|all) and the deploy-pipeline recipe. Routine install steps stay ondocs.healthlog.dev.migration/— release-by-release migration notes. Read the entry for the version you're upgrading from.audit/— per-release audit summaries archived for forensic traceability.apple-store-connect-checklist.md— the iOS submission gate.doctor-report.md— PDF generator design notes.codex-protocol-spec.md— Codex / ChatGPT OAuth protocol reverse-engineering notes.ui-guidelines.md— UI / a11y house style.
If you're a self-hoster looking to spin up an instance, start at https://docs.healthlog.dev or jump to the Quick Start in the project README.