Files
HealthLog/docs
Marc-André Bombeck adc7baca14 Fold only complete local days and repair means folded from part of one
The daily-mean consolidation and the dense hourly fold cut at
`now - threshold` instead of a local day boundary. A day was folded in two
runs and the second run overwrote the stored mean with the mean of the
later part alone: every mean-type day, and the boundary hour of every
heart-rate, HRV and SpO2 day, plus the derived resting figure and the DAY
rollup of such a day. The Health Connect importer split its raw window at
the same unaligned instant.

- Fold up to the start of the account's local day the threshold ends in
  (`foldBoundary`), for every consolidation pass and the Health Connect
  importer's raw/hourly split.
- A window that already has a live `stats:` row is refolded from every
  sample of it, live rows plus the fold's own tombstones; with none left
  the stored mean stays.
- `folded_window` refuses a raw sample only when its local day lies before
  the aligned boundary and a live `stats:` row of its source covers it,
  also within reach of the sample after a timezone change.
- A deletion inside a day the fold had not finished is class B.
- Add a one-time, resumable fold repair per account that recomputes each
  hourly and daily mean from its remaining samples and writes only values
  that differ, recorded in `measurement_fold_repairs` (migration 0389).
- The compaction-tombstone purge waits for the repair per account, and the
  boot sends no purge run before one account is repaired.
- The restore keys live `stats:` ids by source, and writes compaction
  tombstones back from a file older than the account's repair, resetting
  the repair.
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docs/ — internal reference + operator playbooks

The user-facing documentation lives at https://docs.healthlog.dev — that's the canonical surface for self-hosting guides, integration walkthroughs, AI-provider setup, and the doctor-report workflow.

The files in this directory are the internal operator playbooks, audit notes, and machine-readable specs that ship alongside the source:

  • api/ — the OpenAPI 3.1 spec for the native-client subset (iOS DTO codegen target). See api/README.md for the preview commands. Also home to the MCP-server contract: api/mcp-capabilities.md (tools, resources, prompts, write model) and api/mcp-skills.md (building a connector / skill).
  • ops/ — operator runbooks: deploy, backup / restore, encryption-key rotation, password reset and account recovery, env checks, TLS pinning, data repair. These are what an operator reaches for during an incident.
  • self-hosting/ — horizontal-scaling notes (HEALTHLOG_PROCESS_TYPE=web|worker|all) and the deploy-pipeline recipe. Routine install steps stay on docs.healthlog.dev. Includes self-hosting/mcp.md — enabling the off-by-default MCP connector and pointing Claude.ai / ChatGPT / Claude Desktop at it, and self-hosting/sso.md — OIDC SSO login: IdP setup, the identity-pinning security model, OIDC_ONLY consequences, and the break-glass runbook. Also self-hosting/geolite2.md — bringing your own offline GeoLite2 databases via GEOLITE2_DIR instead of sending login IPs to a third-party lookup. And self-hosting/account-sharing.md — letting one account on the instance open another's health record: the three access levels, the eight sections a grant can be narrowed to, managed profiles for somebody with no login and the guardians who look after them, what revocation does and does not undo, and which trust properties of the instance are unchanged by any of it.
  • migration/ — migration notes. Currently only v1.3 to v1.4; later releases are covered by CHANGELOG.md and https://docs.healthlog.dev.
  • integrations/ — per-integration reference (Withings, Fitbit, Google Health, WHOOP, Apple Health, AI providers, data import).
  • adr/ — architecture decision records.
  • security/ — threat-model notes.
  • diagrams/ — architecture diagrams rendered through docs.healthlog.dev.
  • releases/ — release imagery.
  • apple-store-connect-checklist.md — the iOS submission gate.
  • codex-protocol-spec.md — Codex / ChatGPT OAuth protocol reverse-engineering notes.
  • ui-guidelines.md — UI / a11y house style.

If you're a self-hoster looking to spin up an instance, start at https://docs.healthlog.dev or jump to the Quick Start in the project README.