Commit Graph
4 Commits
Author SHA1 Message Date
Marc-André Bombeck b28fa4d4a5 merge: suppress-during-illness Rest Mode + FHIR Condition + doctor-report 2026-06-16 22:27:13 +02:00
Marc-André Bombeck c59cf0b652 feat(illness): Rest Mode — annotate score/recovery/streaks during an active episode + FHIR/doctor-report
An active illness/condition episode annotates, it never penalises: the
measured number is untouched, only the narrative changes.

- rest-mode.ts: one server-authoritative resolver (module-gated, fail-soft)
  for "is the account in Rest Mode + which episodes back it". iOS mirrors the
  resolved context, never recomputes the suppression.
- health-score: /api/analytics attaches a value-free Rest Mode annotation;
  computeHealthScore stays pure (score never adjusted).
- recovery-score: computeRecoveryScore carries the Rest Mode context as of the
  scored day; the persisted blend is unchanged.
- coach-nudge: pause cadence-nudges during an active episode (new
  skippedDuringIllness counter, gate sits before the trigger search).
- achievements: bridgeFrozenStreakGaps freezes (does not break) every
  day-streak across illness days; never invents a streak, a non-illness gap
  still breaks.
- coincident-deviation: reframe a fired flag as illness-explained; vital
  numbers untouched. Surfaced as a neutral line on the insights card.
- coach snapshot: illness history + active illness as load-bearing context so
  the coach knows about Rest Mode (no decrypted note reaches the prompt).
- FHIR: illness episodes map to Condition (generic disease root, label on
  code.text, patient-reported/unconfirmed) + a bounding Encounter.
- doctor-report: module-gated illness section in the aggregator + PDF table
  (retrospective, neutral palette); FHIR Condition section in the bundle.

i18n x6 for the report + reframe copy. Tests: score-annotation-not-
penalisation, streak-freeze, coach-nudge pause, FHIR Condition/Encounter
mapping, doctor-report inclusion, Rest Mode resolver. typecheck/lint/test
green, openapi in sync, knip clean.
2026-06-16 22:25:50 +02:00
Marc-André Bombeck 745fa28c8b feat(illness): correlation + recovery-gap engine
Add the retrospective correlation engine for illness episodes: a pre-onset
anomaly scan (deviation in robust SDs from the user's own median±MAD
baseline), the nadir / what-dropped across the active span, and the
recovery-gap (physiological return-to-baseline vs the felt-better marker).
CHRONIC_ONGOING is excluded from the gap. Every derived number is gated by
the shared coverage/confidence model — a thin signal asserts nothing rather
than showing a wrong figure.

The baseline window ends strictly before the pre-onset lookback, so an
episode's own days can never contaminate the baseline it is measured against.
Reads are DAY-native (rollup tier with a live-SQL fallback), reusing the
baseline engine's read path so the rollup-vs-live parity carries over.

Surfaces:
- GET /api/illness/episodes/{id}/correlation — per-episode findings (gated
  Derived wire shape; red-flag escalation for sustained low SpO2 / fever).
- GET /api/illness/insights — cross-episode retrospective ("sick N times ·
  typical recovery gap X days"), with the typical-gap withheld below the
  min-sample floor. Retrospective only — never a predictor or diagnoser.

Reliability battery: golden-fixture recovery-gap math, rollup-vs-live parity,
baseline-contamination guard, thin-data / coverage-gate, red-flag escalation.
Born-gated + owner-scoped; server-authoritative DTO (iOS renders). i18n ×6.
2026-06-16 22:16:19 +02:00
Marc-André Bombeck b079431a8d feat(illness): add the condition-journal MVP behind a born-gated module
Introduce a retrospective illness/condition journal: episodes with a
lifecycle (acute / chronic-ongoing / recurring / flare) and a daily
symptom timeline forked structurally from the cycle log-day surface. The
journal is a record, not a medical device — no prediction or diagnosis UI.

- Register `illness` as a born-gated (opt-in / default-off) module. The
  gate resolver flips the disabled-allowlist default to off for born-gated
  keys, so the surface stays dark until the account opts in from the
  Modules hub. `isIllnessEnabled` + `requireIllnessEnabled` delegate to the
  module foundation (one source of truth) and re-stamp an illness errorCode.
- Episode CRUD under /api/illness: list / create / get / edit / resolve /
  delete, plus a per-episode-day day-log upsert on (episodeId, date). Every
  route wraps apiHandler, Zod-validates with returnAllZodIssues, narrows
  userId from auth, builds data field-by-field, and gates the module.
  Free-text notes encrypt at rest through the shared Bytes codec.
- Log-day sheet (cycle fork): ~8 Jackson/WURSS symptom chips 0-3 + a
  functional-impact group + fever + an encrypted note, one row per day.
- Episode history page + a born-gated nav entry, neutral palette, status
  via a neutral Badge, retrospective-only copy. i18n across all six locales.
- Cover the new routes in the module-route-gate inventory; unit tests for
  the day-log upsert, the gate enforcement, and the born-gated resolver.

The /api/auth/me module map now projects the `illness` flag (openapi.yaml
regenerated).
2026-06-16 21:09:35 +02:00