Commit Graph
2486 Commits
Author SHA1 Message Date
Marc-André Bombeck f72ec02484 fix(labs): charge the shared record-write bucket on OCR commit
POST /api/labs/ocr/commit can write a whole report and mint markers, yet it
was the one lab write without a ceiling. It now charges the same per-account
record-write bucket as POST /api/labs and POST /api/biomarkers and answers
429 record_write.rate_limited once exhausted.
2026-10-15 20:24:01 +02:00
Marc-André Bombeck 5d6216a59f fix(labs): resolve biomarker delete through the record-scoped labs authority
DELETE /api/biomarkers/{id} used a bare requireAuth() while the PUT beside
it requires requireRecordAuth("manage", "labs"). The delete now uses the
same authority and, as a manage-level hard delete, files what it destroyed
(name, unit, reading count) through destroyedDetails.
2026-10-15 20:24:00 +02:00
Marc-André Bombeck 6dd71f0103 fix(medications): keep scoped credentials out of the dose arrival record
The dose arrival record describes the phone's Apple Health sync. The
measurement batch already leaves it alone for a narrow, single-purpose
credential; the intake batch now does the same, so the record stays
honest should the route ever accept such a credential.
2026-10-15 16:38:12 +02:00
Marc-André Bombeck f665a42789 fix(medications): converge a same-day Apple dose onto the slot's take
The extra-dose rule split a dose that HealthLog already recorded: a tap
at 08:00 and the same dose arriving from Health at 08:20 became two
doses and consumed stock twice, and a dose edited in Health (a new
record, a new time) became a second dose next to the first. The rule
now follows the calendar and the record: a take on another local day
is another dose; on the same day, a take logged in HealthLog converges
with the incoming record, a new record that names the slot as its
scheduled time is the slot's dose recorded again, and only an
unscheduled record more than a minute from the held one is an extra
dose.
2026-10-15 16:38:12 +02:00
Marc-André Bombeck 03b24461ad feat(healthkit): record Apple Health dose arrivals and the last background arrival per type
Migration 0401 turns healthkit_type_syncs.type into text so the ledger can
hold MEDICATION_DOSE, and adds last_background_at (seeded from rows whose
latest arrival was a background one). POST /api/medications/intake/bulk
takes syncTrigger and records APPLE_HEALTH dose arrivals; the Apple Health
status read serves a MEDICATION_DOSE freshness entry and lastBackgroundAt
on every entry with arrival facts.
2026-10-15 15:33:30 +02:00
Marc-André Bombeck 6313c0174a Merge branch 'v1424/readiness' into release/v1.42.4 2026-10-15 15:24:29 +02:00
Marc-André Bombeck 91ccd154b1 test(labs): register the overview route in the sharing and module-gate inventories 2026-10-15 15:19:46 +02:00
Marc-André Bombeck b17a250894 feat(record-settings): publish connection health for a managed record's integrations
The guardian's read of a managed record's connections now carries the same
server-resolved health the owner's own envelope does, loaded for the record
and never for the guardian. The legacy state stays on the wire for one
transition release.
2026-10-15 15:06:02 +02:00
Marc-André Bombeck 7c905249fb fix(medications): page the side-effect list and name every GLP-1 medication in the timeline 2026-10-15 15:05:51 +02:00
Marc-André Bombeck 53e60f43f1 feat(labs): list every marker from a server-side per-biomarker overview 2026-10-15 15:03:06 +02:00
Marc-André Bombeck 600145427b docs(measurements): describe the 10-minute heart-rate bucket in the batch route header 2026-10-15 14:58:15 +02:00
Marc-André Bombeck de40db7ad0 Merge branch 'v1424/fixes' into release/v1.42.4 2026-10-15 12:23:55 +02:00
Marc-André Bombeck 73c4dda224 fix(visits): reach every lab result, condition, document and visit from the link pickers
The visit form's lab picker offered the newest 200 results, the condition
picker the newest 100 conditions, the document pickers the newest thousand
documents and the document sheet's visit picker the newest 100 visits.
On a long record everything older could not be linked.

Each picker now opens on the records around the date of the thing being
linked, pages older and newer from there, and searches through the list
route itself. Records already linked always show, from the labels the
record's own read carries and from what was picked in the sheet.

The lab list takes a q filter over analyte and panel, the condition list
from/to/q/offset/sortDir, and the visit list an offset.
2026-10-15 11:24:40 +02:00
Marc-André Bombeck f2646bc186 test(integrations): cover the health field on the status routes 2026-10-15 11:15:06 +02:00
Marc-André Bombeck dad9a7778e fix(medications): keep an extra Apple Health dose off a slot that already holds one
A HealthKit dose event binds to a slot by window band, and a weekly
schedule's band reaches a day either side of its slot. An extra dose
logged the day after a scheduled one landed on that slot and overwrote it
last-write-wins: the slot's time changed and the extra dose was stored
nowhere. An external dose record whose band slot already carries a
different take is now recorded as its own unscheduled dose.

The dose history now lets the take stored on a slot claim it before an
extra dose stored on its own instant, instead of following the order the
rows were read in, so the extra dose reads as off-schedule.
2026-10-15 11:02:38 +02:00
Marc-André Bombeck d10179f9a3 feat(integrations): resolve one health state per connection
Fold the ledger state, liveness verdict, plan and scope gaps and the
provider reauth flag into ok / limited / degraded / action_required with a
reason code, the one action, the unavailable types and redacted
diagnostics. Keep the last ten sync attempts per connection for those
diagnostics, publish the state on the integrations envelope, every
per-provider status route and the Apple Health config read, and page the
operator once per failure streak instead of once a day.
2026-10-15 11:01:16 +02:00
Marc-André Bombeck 03e80c1a94 fix(labs): drop the printed range text when an edit retires the conversion
Changing the value of a converted reading cleared sourceValue and
sourceUnit but kept the printed range text, which is written in the
report's unit. With the unit gone every reader presented it as the marker
unit's window, beside numbers in another unit. The text now goes with the
conversion record (a whole-form echo of it does not bring it back); the
bounds, already converted into the marker's unit, stay.
2026-10-14 19:49:33 +02:00
Marc-André Bombeck 42b66b2228 Merge branch 'v1423/labs' into release/v1.42.3 2026-10-14 19:34:44 +02:00
Marc-André Bombeck 035ae37ee4 Merge branch 'v1423/integrations' into release/v1.42.3 2026-10-14 19:20:16 +02:00
Marc-André Bombeck cd1449e63e fix(labs): keep a reading's conversion record unless its value actually changes
The single-reading edit cleared sourceValue and sourceUnit whenever the body
carried a value, and the web edit sheet always sends one, so a date or note
edit erased the "converted from" hint. It is now cleared only when the value
differs from the stored one. The sheet also opened a converted reading at its
stored precision (100.90191999999999); it now starts from the value as the lab
surfaces show it and leaves an untouched value out of the request, so the
stored full-precision number is not replaced by its rounded display.
2026-10-14 19:15:33 +02:00
Marc-André Bombeck 47a91d6922 fix(labs): never present a converted reading's printed range in the wrong unit
A converted reading's bounds move with its value, but the printed range text
stays in the unit the report used, and every reader preferred that text: the
list showed "Report range 3.9 to 5.5" beside 100.9 mg/dL, and the doctor
report and the FHIR referenceRange.text did the same. The text is still
stored verbatim. The range resolver now takes the reading's sourceUnit (as a
required field, so no reader can forget to select it) and, for a converted
reading, leaves the window's text empty so every surface states the converted
bounds in the marker's unit, and hands the printed text over separately with
its unit. The lab DTO carries it as printedReferenceText, and the note beside
a reading shows it as "as printed in mmol/L: ...".
2026-10-14 19:10:49 +02:00
Marc-André Bombeck 4793edb961 test(integrations): pin the Withings plan handling and the Oura scope gap; document the plan change 2026-10-14 19:08:22 +02:00
Marc-André Bombeck 044f9008ba fix(oura): ask for the spo2 and heart_health scopes, explain a missing scope calmly
Oura's current authorization server enforces scopes per collection.
daily_spo2 needs spo2; vO2_max, daily_cardiovascular_age and
daily_resilience need heart_health. The authorize request now asks for
both.

A grant issued before keeps answering 401 on those four collections
while every other one succeeds. Such a 401 next to a success is now
recorded as a scope gap rather than a failure: it no longer counts
toward the reconnect threshold, it no longer forces a token refresh once
known, and the Oura card asks for one reconnect instead. The Withings
card names the readings the account's API plan withholds.
2026-10-14 19:01:02 +02:00
Marc-André Bombeck cc0313c955 fix(labs): re-derive a marker's analyte key when its name or unit changes
The key is a function of the marker's name and unit, but it was only ever
filled, never replaced, so a marker renamed from Glucose to Cholesterol kept
converting readings with the glucose factor. The marker edit now re-derives
it with the same match the creation paths use (clearing it when the new name
matches nothing), and the fill step a reading runs brings a stored key back in
line with the name, so a key written before this fix is corrected the first
time it matters. The scan review derives the key the same way as the commit.
2026-10-14 18:59:32 +02:00
Marc-André Bombeck cc507deafa fix(notifications): log every refused notification answer
A quick answer whose request never reached the route left no trace: a
redirect in front of the app turns ntfy's POST into a GET, which Next
answered 405 before any wide event, and the worker-only and demo-mode
refusals in the proxy wrote nothing either. The proxy now answers a
non-POST on the action path itself with 405 and Allow: POST, and every
refusal it makes there writes one warn line with a reason and the path
without its token. The route's rate-limit refusal carries a reason too.

The regression test sends the action ntfy publishes, in the shape ntfy
sends it, through the real proxy and route against Postgres.

Refs #1203
2026-10-14 18:57:06 +02:00
Marc-André Bombeck 39b0cabb43 fix(withings): keep the sync inside the account's API plan
Withings split its public API into plans on 2026-10-12. A request naming
one meastype outside the free plan is refused whole with status 277, so
every measure sync stopped importing anything, and the 200..299 reauth
range parked the connection at error_reauth.

The measure, sleep-summary and ECG legs now drop the documented advanced
types on a 277, split the rest until the refused keys are isolated
(bounded), remember the refusal per connection and re-probe weekly. 277
is classified persistent and never enters the ledger; connections parked
over it are lifted by the fallback tick, and the held watermark lets the
next run read the whole gap.
2026-10-14 18:53:58 +02:00
BernhardBuckel caa7a937fd feat(labs): convert a reading into its marker's unit when the pair is known
Slice 2 of phase 3 of #1095. A reading that stated a unit other than its
marker's was refused. When the marker's analyte is known and the registry has the
pair, the three write paths now convert it instead: POST /api/labs, the OCR
commit and the document commit.

The converted value is stored at full precision in the marker's unit, with what
the report printed in the existing source_value and source_unit columns. The
report's own reference window is in the printed unit, so it is converted with the
value; otherwise the verdict would compare a converted value with an unconverted
window. A pair the registry does not have is still refused as before (the 422
now says why), as is a marker whose analyte is unknown.

The marker's key is filled the first time a reading needs it. The same scan
committed again is still a duplicate: a converted row holds the number in the
marker's unit, so the duplicate check also matches on what the report printed.
Editing the value of a converted reading clears the conversion record, because
the number is then the person's own.

The lab result DTO and the OpenAPI schemas (labs and the OCR commit) carry
converted, sourceValue and sourceUnit.

Refs #1095
2026-10-11 20:28:00 +02:00
BernhardBuckel 52ea3b9c2f feat(labs): link a marker to its analyte for the unit conversion
Slice 1 of phase 3 of #1095. A Biomarker row keeps only its name, so nothing
said which analyte it was. This adds the explicit alias list in the catalog the
issue settled on, including the registry-only keys (urea, blood urea nitrogen,
uric acid, total calcium, total bilirubin), and sets biomarkers.analyte_key
(from migration 0385) from it.

matchAnalyteKey equals a marker's folded name against the localised names of the
catalog seeds the registry knows and against the alias list. It matches the
whole name only, so "Calcium (ionisiert)" is not "Calcium"; a name two analytes
claim matches neither; and the marker's own unit must be one the analyte reaches,
so a marker called "Glucose" in a unit the registry cannot convert stays
unlinked.

The key is set when a marker is created (the biomarker route, the mint used by
lab writes, the legacy backfill) and, for an existing marker, by
ensureAnalyteKey the first time a reading needs it. It never overwrites a key
that is set. There is no boot job for the existing markers: the conversion that
uses the key fills it on first use, and a sweep can be added later if wanted.

The key is returned on the biomarker API and in the OpenAPI schema.

Refs #1095
2026-10-11 20:04:43 +02:00
Marc-André Bombeck 88aec7edb6 fix(search): key the in-flight search by actor and record
Two tabs searching two different records (one's own and a shared one)
cancelled each other, because a new search aborted any earlier one by
the same actor. The slot is now held per actor and record.
2026-10-11 15:17:43 +02:00
Marc-André Bombeck 24f06884b3 fix(reminders): an ended course reads as not reminding
The worker expands no slot past endsOn, so it never reminds for a
course that has ended, but remindersActive still read true for it. The
reminder gate now includes the course end on the person's clock, so the
published value, the worker and the admin check make the same decision.
2026-10-11 15:16:54 +02:00
Marc-André Bombeck 38900656a3 fix(audit): name automatic dose recording in medication audit rows
Switching autoMarkTaken on or off now appears in the medication.update
row with its previous value, and medication.create records whether the
medication starts with doses recorded automatically.
2026-10-11 15:11:27 +02:00
Marc-André Bombeck 0ff1340ff4 fix(medications): never backfill days an edit reopens under auto-take
A start moved earlier, an end moved later or removed, or a medication
made active again reopened past slots, and the auto-take pass filled up
to a week of them as taken. The course window writer and the
re-activation paths now move the auto-take floor to the moment of the
edit.
2026-10-11 15:07:06 +02:00
Marc-André Bombeck a4cccc11ba fix(medications): keep an auto-taken rolling cadence moving
A rolling cadence yields only lastIntakeAt + N, so a slot the auto-take
pass never records (before the switch-on floor, past the catch-up
window, inside a pause, skipped or removed by the person) held it still
for good. Step the cadence forward by N past every such slot, keeping
its rhythm, and feed the stepped anchor to the card, dashboard and
schedule-tool next due so they show the slot the pass will record.
2026-10-11 15:00:37 +02:00
Marc-André Bombeck 2f780df0b0 Merge branch 'v1422/autotaken' into release/v1.42.2 2026-10-11 14:41:28 +02:00
Marc-André Bombeck 7ee72d0161 fix(search): admit the search POST at read level through a declared, frozen readOverPost 2026-10-11 14:21:56 +02:00
Marc-André Bombeck 195fa28cc5 feat(medications): publish the resolved reminder decision as remindersActive 2026-10-11 14:09:22 +02:00
Marc-André Bombeck 55bfb0a439 feat(sync): carry the automatic-recording marker on intake upserts 2026-10-11 13:56:28 +02:00
Marc-André Bombeck 41049b3837 fix(search): bound the clinical kinds by the search budget, one search per actor, query in a POST body 2026-10-11 13:56:24 +02:00
Marc-André Bombeck 4386ac820e test: register the auto-take job and field in the existing guards 2026-10-11 13:50:56 +02:00
Marc-André Bombeck 3c6150e837 fix(admin): sum today's AI spend on each account's own local day 2026-10-11 13:50:17 +02:00
Marc-André Bombeck c94e109bf0 feat(medications): record scheduled doses automatically 2026-10-11 13:46:16 +02:00
Marc-André Bombeck 5dbc6fcec1 fix(notifications): keep a quick answer single-use after its entry is purged and document the topic exposure 2026-10-11 13:46:12 +02:00
Marc-André Bombeck a4a3318de3 fix(mood): open the reminder's entry sheet only in the own record 2026-10-11 13:37:46 +02:00
Marc-André Bombeck 3c4e053dcd Merge branch 'v1422/fixes' into release/v1.42.2 2026-10-11 13:28:29 +02:00
Marc-André Bombeck dcb7a0bc09 fix(ai): count the daily AI budget on the account's own day
The token ledger keyed every day on UTC while the daily briefing and the
other per-day generations run on the account's local day, so east of UTC
the first generations after local midnight were refused against the
previous day's spent ceiling. The budget day is now the calendar day in
the account's time zone; each request still resolves it once and books
its reservation and reconcile on the same row. The medication extraction
reads relative phrases against the same local day, the operator's spend
card shows the operator's own day, and the limit copy says the budget
resets at midnight in the person's time zone.
2026-10-11 13:09:12 +02:00
Marc-André Bombeck 334cb4e979 Merge branch 'v1422/search' into release/v1.42.2 2026-10-11 13:06:07 +02:00
Marc-André Bombeck 274cf4900e test(notifications): pin the content preference in backups and the action error codes 2026-10-11 12:46:12 +02:00
Marc-André Bombeck 1644acf443 feat(palette): list hits from the record under the local results 2026-10-11 12:39:54 +02:00
Marc-André Bombeck 12a8ab7c63 feat(documents): open a PDF or image original in a new browser tab
The document sheet gains an Open in new tab action for the types the
browser renders itself (PDF, JPEG, PNG, WebP, GIF), so a long report
gets the browser's own zoom and search instead of the small preview. It
opens the object URL the sheet already fetched through the app transport:
a plain navigation to the serve route carries no record-session
assertion and would be refused inside a shared record. Every other type
keeps the download only, and the serve route's matrix now pins SVG and
HTML to attachment as well.
2026-10-11 12:37:57 +02:00
Marc-André Bombeck fca1260b20 fix(oura): exchange and refresh tokens at Oura's current token endpoint
Apps from Oura's current developer portal receive codes from
moi.ouraring.com, and the documented api.ouraring.com/oauth/token answers
those codes with 400 invalid_request, so connecting failed and every
collection read came back 401. Token requests now go to
moi.ouraring.com/oauth/v2/ext/oauth-token first. A code works once, so the
documented endpoint is never asked first: a code whose callback names the
current server goes nowhere else, and only an older app's code or refresh
token gets one retry there after a 400, 401 or 404. The callback checks the
RFC 9207 iss parameter when present and refuses a foreign issuer.
2026-10-11 12:34:33 +02:00