Commit Graph
150 Commits
Author SHA1 Message Date
Marc-André Bombeck a2fceb5585 fix(backups): answer the restore preview from counts kept with the copy
The restore dialog asked GET /api/admin/backups/{id}/summary for the
contents of a copy, and the route read the whole stored copy to answer:
every piece opened, every measurement parsed, the rest validated. On an
account of 1.8 million readings on slow hardware that took about two
minutes. The dialog stopped waiting after 15 s and said the contents
could not be read, and its automatic retry made the server read the
whole copy a second time.

The copy passes through the process once anyway while it is written, so
the preview is worked out there and kept on the row (DataBackup.preview,
migration 0364): the summarizeBackup counts, the schema version, and
the inner key ids with the sections they sit in and one sample value
each. Every creation path goes through storeBackupBlob (the weekly and
manual pass, and an upload), so every new copy carries one. The column
is plain JSON: counts and dates only, and the samples are ciphertext
that stands for what is inside the copy, which a key rotation must not
re-seal.

The route answers from it without opening the copy. Both verdicts are
taken again on every read, from what the preview keeps: whether this
release restores the schema version, and whether this server holds the
keys the copy needs. The pieces are still counted against the row, so
a copy that lost one is refused as the restore and the download refuse
it. A preview names the copy it describes and is ignored once the copy
changes; converting a single stored value into pieces carries it over.

A copy written before this has no preview. It is read whole once, as
before, and the result is kept on the row, so it is slow only the first
time; concurrent requests for the same copy share the one read.

Only a file that fails the schema answers 422 "Backup payload failed
schema validation". Read refusals keep their codes; anything else is
the server failing and answers 500.

The dialog no longer retries the preview, waits up to 55 s, and when it
stops waiting on an older copy it says the copy is still being read and
to open the dialog again in a few minutes.

Refs #1031
2026-09-30 22:51:02 +02:00
Marc-André Bombeck add6d1fadc fix(restore): order the restore and the consolidation passes by one lock
A restore on a freshly booted instance failed its clearing step with a
deadlock (40P01) while the boot-time step consolidation was folding the
same account. A consolidation day updates or mints the day's total and
then soft-deletes the day's per-sample rows; the restore deletes every
reading of the account in one statement. When the restore reached a
day's samples before its total, each side held what the other needed
next.

The restore already took an advisory lock per account before its first
delete. Every day transaction of the passes built on runConsolidation
(step and mean consolidation, the per-sample cumulative drain, the dense
intraday retention) now takes the same lock in shared mode as its first
statement. A restore that starts mid-day waits for that day to commit;
a day that would start while a restore runs is refused at once, and the
pass leaves that account for its next run instead of folding rows the
restore is about to replace. The passes still share the lock with each
other.

A new integration test builds the lock order that deadlocked, with a
row trigger holding the consolidation on the day's total while the
restore starts; before this change the consolidation was cancelled with
a deadlock. A guard test requires every transaction in a pass on
runConsolidation to open with the shared lock.

Refs #1031
2026-09-28 00:34:11 +02:00
Marc-André Bombeck f2569b6fdf fix(restore): carry at most a hundred readings per insert statement
Prisma's debug logger keeps the arguments of its last hundred calls in
memory whether or not logging is on, and the client and the Postgres
adapter both log every statement with its parameters. A restore that
wrote 1 000 readings per statement therefore kept a copy of about the
last 100 000 readings alive for the whole measurement write: about
60 MB on 1.8 million Apple Health readings, next to a V8 heap limit of
524 MB in the default 1 GB container.

The bulk insert now splits whatever it is handed into statements of at
most 100 rows, which holds about 7 MB. The Apple Health export import
goes through the same helper and gets the same bound. The write costs a
little time: 94 s instead of 76 s for 1.8 million readings on a fast
host.

Refs #1031
2026-09-28 00:06:47 +02:00
Marc-André Bombeck 206da07e8c Merge branch 'fix/meds-ended-and-mental-health' into release/v1.39.4 2026-09-27 14:18:09 +02:00
Marc-André Bombeck 6f37cbdb23 fix(backup): carry each medication's category through backup and restore
The clinical category a person picks for a medication lives in a side table
created at runtime, outside the schema. The backup builder and the restore
only walk schema models, so no backup ever carried it: after a restore every
medication read as "Other".

Both backup formats now carry the category inside its medication, and the
restore writes it back in the same transaction as the medication. A file
from before this change restores as before; a category this server does not
know reads as Other instead of refusing the file.

The backup plan gains a list for tables created with raw SQL, and a check
that every such table in the source either maps to a schema model or has a
verdict there, so the next one cannot drop out of backups unnoticed.
2026-09-27 14:17:42 +02:00
Marc-André Bombeck c7e53176c1 Merge branch 'fix/v1394-review-correctness' into release/v1.39.4 2026-09-27 14:00:04 +02:00
Marc-André Bombeck eda87fd4a7 fix(sync): expire delta cursors issued before a restore or a data wipe
A restore writes rows back with their original updatedAt, behind every
paired client's watermarks, and removes rows without leaving tombstones.
A client that kept its cursor would miss both on its next incremental
pull. The same holds after the person deletes all their data.

`users.sync_reset_at` (migration 0363) records when the record was last
replaced: the restore stamps it as its last write and again right after
the commit, the per-account and the admin wipe stamp it inside their
transactions. Cursors now carry the time they were issued, and
/api/sync/changes answers its existing `cursorExpired` to a cursor issued
before the reset, or one without an issue time on an account that has
one. The comparison is on the issue time, because after a restore a
freshly drained cursor still carries old watermarks.
2026-09-27 13:46:38 +02:00
Marc-André Bombeck daf386fe7f fix(backup): use the renamed after-transaction allowance for the chart rebuild 2026-09-27 13:32:58 +02:00
Marc-André Bombeck 5173049130 Merge branch 'release/v1.39.4' into fix/v1394-review-correctness 2026-09-27 13:27:59 +02:00
Marc-André Bombeck fc13b9de5c fix(restore): skip expired tombstones and give the chart rebuild its own limit
A restore now leaves out measurement tombstones deleted longer ago than
the tombstone retention. The nightly purge removes exactly those rows,
the delta feed answers cursorExpired for every cursor that could still
be served one, and the consolidation repairs look only inside the same
horizon. Younger tombstones keep their readers (a lagging paired client,
the undo of a recent delete, the repairs, the duplicate guard on
re-uploaded samples) and are written as before. The backup file is
unchanged. On a seeded account of 1.89 million readings whose 1.68
million tombstones were past retention, the restore on a slowed database
took 5.4 min instead of 15.

The rollup fold after the commit rebuilt five years of buckets under the
60 s request statement limit and could be dropped on a slow disk, leaving
the charts empty until the next boot. `recomputeUserRollups` takes a
`statementTimeoutMs` that scopes each aggregate and persist transaction
with SET LOCAL, and the restore passes its after-commit allowance.

Fixture tombstones in two round-trip tests were dated in July 2026 and
had aged past the retention; they are now relative to the run.
2026-09-27 13:21:18 +02:00
Marc-André Bombeck 874d02294e fix(backup): let the restore job's budget admit large accounts
A restore is refused before it deletes anything when its transaction limit
would run past three quarters of the job's expiry. At two hours that refused
a same-size replacement of about four million readings. The expiry is now six
hours, which admits ten million over ten million; a dead worker still frees
the account within minutes through the heartbeat, so the longer expiry does
not hold an account longer.

The refusal now names both counts, the readings in the backup and the ones the
account holds now (removed readings included until the nightly clean-up),
since clearing the latter costs time too.
2026-09-27 13:13:50 +02:00
Marc-André Bombeck 3482581ce1 fix(encounters): name the practice address on an appointment nudge again
Sealing the practitioner's address left the appointment arm reading the old
readable column, which is now empty, so a booked visit's push lost the address
on booking, rescheduling and restoring a deleted visit.

The reminder no longer keeps its own copy of the address. The reminder tick
resolves it from the owning visit's practitioner when it builds the push and
decrypts it there, so an edit of the address also reaches a nudge that is
already booked. MeasurementReminder.location stays NULL on appointment rows:
booking writes none, a re-anchor clears one an earlier release wrote, and a
backup neither carries nor restores one. A checkup's own free-text location is
unchanged.
2026-09-27 13:07:10 +02:00
Marc-André Bombeck 02801bdfda Merge branch 'fix/restore-large-account-clearing' into release/v1.39.4 2026-09-27 12:14:04 +02:00
Marc-André Bombeck e0b4f3c427 fix(restore): size the restore budget by the rows written, and keep test housekeeping off the short limit 2026-09-27 11:57:37 +02:00
Marc-André Bombeck d44b875ec6 test(restore): stub the reading count the restore budget now reads 2026-09-27 11:37:51 +02:00
Marc-André Bombeck 93b6c086b4 fix(restore): let a large restore outlast the request statement timeout
A restore of an account with 1.9 million readings, most of them deleted
by the nightly consolidation and still awaiting the purge, was cancelled
in its clearing step: `DELETE FROM measurements` ran past the 60 s
statement timeout every pooled connection carries, and the whole restore
rolled back with a message that named no cause (#1031).

Most of that statement was not the delete. Two columns point into
`measurements` with ON DELETE SET NULL and had no index, so Postgres
scanned `personal_records` and `ecg_recordings` once per deleted reading:
38 of 40 s on a seeded account with 300 personal records. Migration 0362
indexes both, which also speeds up the tombstone purge and account
deletion.

The restore transaction now sets its own statement and idle-in-transaction
limits to the transaction budget with SET LOCAL, and the budget counts
the rows the account holds as well as the rows the file carries. A
rolled-back restore names what the database refused it over (timeout,
lock, constraint, storage, connection, other) on the job row, the
console, the audit row and the wide event.
2026-09-27 11:24:41 +02:00
Marc-André Bombeck 78fc22d0f8 Merge branch 'coach/wpF-contracts' into release/v1.39.4 2026-09-27 11:10:37 +02:00
Marc-André Bombeck f2e32afb24 fix(privacy): store environment coordinates at 1 decimal instead of 2
The home location of the environment module was rounded to 2 decimals,
about 1 km, which places a home in a neighbourhood rather than the town the
schema comment promised. The weather archive it feeds is gridded at 9 to
25 km, so the extra precision bought nothing.

Every stored coordinate of the module now goes through the same 1-decimal
rounding (about 11 km north-south, 7 km east-west at 50° N): the home, the
travel periods, the geocoder's results, the per-day weather rows, and a
restore of a file written with finer values. Migration 0361 rounds the
existing users, travel periods and per-day rows; running it twice changes
nothing more. The answers keep their shape, plain numbers. The API
descriptions and the schema comment say 1 decimal now.
2026-09-27 10:37:37 +02:00
Marc-André Bombeck a8b3e5d7f4 feat(coach): store a turn's result tables encrypted beside the message
A new nullable column, coach_messages.results_encrypted, holds the tables
of values a turn read as AES-GCM ciphertext; only their metadata rides the
plaintext provenance. readMessageResults serves them to the owner, each
table whole or withheld with a reason. The provenance restore learns the
steps, method, table metadata, chips, clarification and the forced-answer
marker, entry by entry against the wire schema.

The column is registered for key rotation, carried through both backup
formats (ciphertext in a disaster-recovery file, readable JSON in a
portable one) and goes with its row on conversation delete and wipe.
2026-09-27 10:36:27 +02:00
Marc-André Bombeck 5eb7956bad fix(privacy): encrypt workout GPS tracks and practitioner contact details at rest
The GPS track of an outdoor workout was stored readable, and its first and
last points are usually the person's front door. The phone number and address
in the address book of doctors and practices were readable too, while the
note beside them was already encrypted.

Migration 0361 adds workout_routes.geometry_encrypted (the geometry loses
its NOT NULL) and practitioners.phone_encrypted / location_encrypted, plus
partial indexes on the backfill's discovery predicates. A track is sealed as
one binary AES-256-GCM value bound to its purpose; the contact fields use the
same Bytes codec as the note. The practitioner's name, practice and specialty
stay readable, because the picker searches and sorts on them.

Every writer stores ciphertext only: workout batch ingest, practitioner
create and edit, and both restore formats. Readers prefer the ciphertext and
fall back to the old column for rows not yet migrated: the workout detail
(map, splits, GPX), the activity insight's climb figure, the practitioner
DTO behind the address book, visits and vaccinations. The wire shape does not
change. An edit's audit row now names a changed phone number or address
without recording either value.

free-text-encryption-backfill covers the three columns in the same pass,
finding a route through its workout. All three are registered for key
rotation (registry, CLI script, and the in-app rotation). A disaster-recovery
backup carries the contact fields as ciphertext only; a portable export
carries them readable. Workout routes are still not part of a backup, as
before. The old columns are marked for removal in a later release.
2026-09-27 09:59:34 +02:00
Marc-André Bombeck 66b1aef40c Merge branch 'fix/encrypt-free-text-and-local-ai' into release/v1.39.3
# Conflicts:
#	src/app/api/import/csv/route.ts
2026-09-26 21:50:05 +02:00
Marc-André Bombeck 4409529c89 Merge branch 'fix/backup-rotation-and-deletion' into release/v1.39.3
# Conflicts:
#	docs/api/openapi.yaml
#	src/lib/jobs/apple-health-import-worker.ts
2026-09-26 21:48:20 +02:00
Marc-André Bombeck 76398c80c2 test(backup): drop an import the as-stored rewrite left unused 2026-09-26 20:59:09 +02:00
Marc-André Bombeck 94aa7c6bd4 fix(backup): read nothing shorter than a ciphertext as needing a key
The shortest value either codec writes is 40 base64 characters. A
shorter string under an ...Encrypted member is not ciphertext, and
reading it as a legacy value would have made a restore demand the v1
key for a field that holds none.
2026-09-26 20:41:52 +02:00
Marc-André Bombeck 7da778760e fix(backup): leave the admin wipe's off-host copies in place, and correct the backup and rotation runbooks
The admin wipe of every account is the operator clearing their own host,
and the bucket's copies are the documented way back from a wipe pressed
by mistake, so it writes no off-host deletion request. Deleting an
account, deleting a managed profile and "Delete all data" still do.

The backup runbook no longer says the worker never deletes an object: it
lists the grant the worker needs (DeleteObject included), when objects
are deleted, the version-4 envelope, the lifecycle check and how to
rotate the off-host key. The rotation runbook no longer says backups are
covered: rotation reaches a backup's envelope, not the content a restore
writes back, and a retired key stays needed until no backup lists it.
The privacy notice beside account deletion says the same about off-host
copies.

A failed import records its failure in a plain try block, and the
extraction test that inflates past the 64 MiB floor gets the time it
needs on a loaded runner.
2026-09-26 20:33:30 +02:00
Marc-André Bombeck 849748c4cd fix(backup): bind new off-host objects to their key and account, and cap what an uploaded backup may inflate to
Off-host objects are now written as envelope version 4: the header names
the off-host key by fingerprint, and the object's key in the bucket
(<date>/user-<id>.json.enc) is authenticated as GCM associated data, so
a copy moved to another account or another night no longer opens.
Objects of versions 1 to 3 still read. BACKUP_ENCRYPTION_PREVIOUS_KEYS
(comma-separated, on the compose whitelist and in the env manifest)
keeps retired off-host keys readable, which is the rotation path the
off-host key did not have.

The admin backup upload counted the bytes that arrived and none after
the gunzip, so a small gzip could expand without limit into the JSON
scanner and take the app down. The inflated bytes are now held to 100
times the compressed bytes read (at least 256 MB, at most 4 GB) and a
file past that is refused with 413 before anything is stored.
2026-09-26 20:18:55 +02:00
Marc-André Bombeck 46eb8c8b94 fix(backup): carry a not-yet-migrated title or note as stored
Sealing a readable Coach title or custom-metric note while building a
disaster-recovery file gave each export a fresh IV, so the streaming
writer and the materialising builder no longer produced the same file.
A row the free-text backfill has not reached yet now rides as stored,
readable, inside the encrypted backup; the restore seals it, and a
migrated row carries its ciphertext verbatim as before.
2026-09-26 19:58:49 +02:00
Marc-André Bombeck 1c7785c23b fix(backup): take off-host copies out with the account, and say which keys backups still need
Deleting an account, deleting a managed profile, "Delete all data" and the
admin wipe now write an off-host deletion request in the same transaction
as the deletion. A new job (offhost-backup-purge, kicked straight away and
run nightly as a backstop) lists the bucket once, deletes every
<date>/user-<id>.json.enc object of each pending account and removes the
request only when nothing of the account is left. A refused delete keeps
the request with the bucket's answer and is retried; the off-host card
shows how many deletions are outstanding and why. A copy the nightly run
was writing while the account was deleted is taken back after the upload.

The off-host card also reads the bucket's lifecycle rule and says plainly
when there is none (every nightly copy kept forever) or when the
credential may not read it.

Every stored backup now records the key ids its content was written
under, and every off-host upload records the same per key. The admin
encryption view lists, per key, the stored copies that need it with the
oldest date, and when the last off-host copy needing it expires. The
"safe to drop" badge now requires that no backup still needs a retired
key, instead of only that every row was rotated.

Migration 0358 adds data_backups.inner_key_ids, the key-use table and the
deletion requests.
2026-09-26 19:54:40 +02:00
Marc-André Bombeck f7b3ce6ee0 fix(privacy): encrypt Coach conversation titles and custom-metric notes at rest
The title of a Coach conversation is the first 80 characters of the
opening message, and the note on a custom-metric reading is free text;
both were stored readable while every other note was encrypted.

Migration 0357 adds coach_conversations.title_encrypted and
custom_metric_entries.note_encrypted (the title loses its NOT NULL) plus
partial indexes on the backfill's discovery predicate. Every writer now
stores ciphertext only: conversation create, proactive nudge, reminder
surfacing, rename, entry create and edit, and both restore formats.
Readers prefer the ciphertext and fall back to the old column for rows
not yet migrated; a ciphertext that does not open throws instead of
falling back. The history title search decrypts in memory, since SQL can
no longer match the title.

free-text-encryption-backfill is a boot-time, idempotent pg-boss job
(staggered past the startup storm, daily discovery tick) that seals each
remaining readable value and nulls it in one transaction per row. A pass
that sees a row twice stops with an error instead of looping.

Both columns are registered for key rotation (registry, CLI script, and
the in-app rotation that walks the registry). A disaster-recovery backup
carries ciphertext only, sealing a not-yet-migrated row on the way out;
a portable export carries readable text. The old columns are marked for
removal in a later release.
2026-09-26 19:46:01 +02:00
Marc-André Bombeck 405c996b6a fix(backup): refuse a restore that needs a dropped key or reaches into another account
A backup carries every encrypted column as the stored ciphertext, and a
restore writes it back verbatim. Key rotation re-seals the stored copy's
envelope but cannot reach inside it, so a copy taken before a rotation
still needs the retired key. Without it the restore went through and
left rows no reader can open.

The restore, the restore preview, the admin upload and the monthly
restore drill now collect the key ids of every inner ciphertext value,
hold them against ENCRYPTION_KEYS and decrypt one value per key. A
missing key, or an id configured with different key material, is
refused before anything is deleted, with the key id named. The restore
status and the preview say which key to put back.

The restore also checks, inside its transaction, that it added no
reference from the account's rows to rows another account owns. The
check is derived from the schema's foreign keys rather than written per
section, so the tag and category upserts keyed on a global key are
covered along with every link table. The illness parent update is
scoped to the owner as well.

The off-host listing now follows every page: the first page held only
the oldest dates, so the drill could read an old object and report the
chain as stale.
2026-09-26 19:22:03 +02:00
Marc-André Bombeck 1eac05b454 fix(documents): key imports by source instance, keep a token on its origin, and harden the import path
- Source keys carry the normalised origin of the Paperless-ngx or Papra
  they came from (source_instance on the document, the alias and the
  purge ledger; unique NULLS NOT DISTINCT). A key stored without one
  (v1.39.2 imports) matches any instance of its system, and a lookup
  without one matches any stored instance. The upload route, the lookup
  route and the import script accept or send it; backups carry it.
- Saving a connection reuses the stored token only for the same origin;
  a new origin needs the token again (422 tokenRequired).
- Document ids are checked against what each system issues (Paperless
  digits, Papra [A-Za-z0-9_-], never . or ..) before any URL is built;
  the Papra organization id likewise.
- Paperless API 9 filters dates on created__gte / created__lte, in the
  picker and the script. A search page the local re-check empties reads
  on, up to five source pages. Tags are read past the first 250.
- The import's key pre-check uses the lookup allowance, a failed fetch
  no longer charges the upload allowance, and one import per key runs at
  a time under an advisory lock, so a double click downloads once.
- Reading and deleting one's own connection works with the documents
  module off and the operator list unset.
2026-09-26 14:20:17 +02:00
Marc-André Bombeck fdc60f69c2 feat(documents): search and import from Paperless-ngx and Papra on request
A person stores one connection per system (base address, Papra
organization id, API token encrypted at rest) and can search it by
document name with tag and date filters, then import picked documents
one per request through the same ingest path as an upload: source-key
answer before any download, content dedup, deleted stays deleted, quota,
provenance, and the person's own AI reading setting. An import can link
the document to the visit, condition or vaccination it was picked for.

The operator lists the instances in DOCUMENT_SOURCE_ORIGINS; unset, the
feature is off. Only listed origins are contacted, through safeFetch with
the origin pinned, redirects refused, timeouts and byte caps. The routes
are cookie-only and owner-only. The token is registered for rotation,
removed by Delete all data, and not carried in backups.
2026-09-26 13:02:36 +02:00
Marc-André Bombeck 39b56ee4e2 Merge branch 'fix/backup-chunked-storage' into release/v1.39.2 2026-09-26 01:49:22 +02:00
Marc-André Bombeck 8ad4610370 fix(backup): make rotation, concurrent writes and old rows safe for pieces
Key rotation re-sealed a single-value backup in place, which holds the
stored string, its bytes, the plaintext and the new ciphertext at once; a
copy can be over a hundred megabytes and the in-app rotation walked 25 of
them per page, enough to run a 1 GB container out of memory. Rotation now
converts each such copy into pieces under the active key instead, one row
at a time. The ~hlgcm1. stream of v1.38.6 to v1.39.1 is read a megabyte
at a time with its tag checked at the end, inside one transaction, so a
copy that fails the check is left untouched; the copy keeps its date. The
scan reads only the first characters of each value. Measured on a copy of
a 2.6 million-reading account (126 MB stored): converted in 25 s with the
heap flat at 57 MB under a 200 MB limit, where re-sealing in place ran out
of heap.

The weekly and manual backup leave an account alone while a restore of
its current copy is queued or running, and count it as skipped, not
failed. A reader whose copy is replaced mid-read answers 409
backup_changed, "replaced by a newer one while it was being read", rather
than the undecryptable error; a restore rolls back with the same code.

Pieces are sealed with a fixed associated-data label, so a value the same
key sealed for another purpose never opens as a piece; rotation re-seals
under the same label. A row holding both a single value and pieces, which
only an older release writing after a downgrade produces, is refused with
a message saying so, and the next weekly run replaces it. Rotation treats a
row deleted between its read and its write as gone rather than an error.
2026-09-26 01:49:02 +02:00
Marc-André Bombeck d5a39603ca Merge branch 'fix/backup-chunked-storage' into release/v1.39.2 2026-09-26 01:03:25 +02:00
Marc-André Bombeck 1e09f30eff fix(backup): store a backup in sealed pieces instead of one value
A stored backup was one value in data_backups.data. v1.39.1 wrote it a
piece at a time but still joined the pieces into that one value, and one
value has to pass through the app whole, so a copy was capped at a fifth of
the heap: 105 MB in the default 1 GB container. An account with 1.75
million readings is past that and could not be backed up at all (#1031).

A copy is now kept as ordered pieces of about a megabyte in the new
data_backup_chunks table (migration 0352). Each piece is sealed on its own
with AES-256-GCM, and its sealed header names the copy (a random stream id
kept on the row), its position and whether it is the last. A reader checks
every piece before it releases a byte, so a piece that is missing, moved,
altered, taken from another copy, or a copy cut short is refused with
backup.payload.undecryptable before a restore deletes anything, and the
second read during the restore checks each piece again.

The write is one transaction, so the previous copy stays whole and readable
until the new one commits. Pieces are written through the model API: a raw
query with a large parameter is kept alive by Prisma's query plan cache,
which left 160 MB of heap behind per hundred one-megabyte inserts.

Restore, preview, download, the restore job and the admin list read both
forms; copies written before this change keep their single value and still
restore. The heap-derived limit is gone. The one limit left is on storage,
BACKUP_MAX_STORED_MB (default 2048), and its message names the setting. Key
rotation covers the pieces, the wipe and account deletion take them with
their backup, and the backup plan lists the table as not carried.

Measured on an account of 2.6 million readings in a 1 GB container with web
and worker in one process: backup 87 s, 97 MiB in 96 pieces, preview 20 s,
download 25 s, restore 264 s with every reading back exactly, peak 567 MiB,
no restart.
2026-09-26 01:02:48 +02:00
Marc-André Bombeck bec79879b5 Merge branch 'feat/document-import-token' into release/v1.39.2 2026-09-26 00:22:43 +02:00
Marc-André Bombeck fabd691128 fix(backup): keep an empty provenance empty on restore
A current disaster-recovery backup writes aggregationProvenance for every
measurement, null included. The restore treated null like a missing field
and marked every Apple Health stats: row without a provenance as
LEGACY_UNKNOWN, which is meant only for backups too old to carry the field.
The nightly daily-mean fold writes exactly such rows, so on a large Apple
Health account a restore changed tens of thousands of readings it was
supposed to put back as they were (#1031).

Only an absent field now takes the legacy path.
2026-09-25 22:40:08 +02:00
Marc-André Bombeck 10a1c3ca2e fix(documents): keep every import key deleted, answer re-sends cheaply
A keyed upload that matched a stored document by its bytes never recorded
its key, so deleting that document let the next import run store it again.
Such keys are now kept as aliases of the document, the source-key check
reads them, and the purge carries them into the ledger with the row's own.

A source key may ride the query string and is then answered before the
body is read or the hourly allowance charged; an upload answered as a
duplicate hands its slot back. GET /api/documents/inbound/source answers
whether a key is held, under the same documents:write scope, so an
importer can skip a download.

aiRead=defer is stored on the row. The summary catch-up, the summary job
and lab auto-staging skip such documents until an explicit Read with AI
or Generate summary clears the marker; backup and restore carry it.

A documents:write caller no longer sees the quota figures on a full vault.

Refs #1038
2026-09-25 22:35:11 +02:00
Marc-André Bombeck 100412a3a6 Merge branch 'feat/condition-body-site' into release/v1.39.2 2026-09-25 22:09:01 +02:00
Marc-André Bombeck 14f0fc4d4f feat(body-sites): record a body site on conditions and add a body-site view
A condition (illness episode) can carry where on the body it sits, in the
person's own words and encrypted at rest, plus an optional side (LEFT,
RIGHT, BOTH). Same enum, codec and reasoning as the procedure's site.

- migration 0354: two nullable columns on illness_episodes, reusing the
  laterality type from 0349
- create and edit accept bodySite and laterality; on PATCH an absent key
  keeps the stored value, so an edit from the shipped iPhone app, which
  never sends either field, leaves them untouched
- GET /api/body-sites: the sites the record holds across visits and
  conditions, folded after the decrypt and bounded per kind; with site
  (and laterality) the visits and conditions there, one hop to their
  documents, lab results and visits. Read in the profile section;
  conditions only under an illness grant with the module on, and links
  into ungranted sections come back as unlabelled placeholders
- the link service reads document and visit links from the condition's
  end of the two existing tables
- /checkups gains a Body sites tab; the visit and condition forms share
  one body-site field pair that suggests sites already used; a
  condition's page links its site into the view
- the doctor report, the clinician page and the MCP doctor-visit summary
  name the site on conditions; the Coach illness block carries it
  sanitised, and MCP get_illness_recovery returns it fenced
- backup and restore carry both fields in both file kinds; the site is
  registered as ciphertext and rotates with the key
- i18n in all seven locales, OpenAPI regenerated

Refs #1025
2026-09-25 21:55:14 +02:00
Marc-André Bombeck 55a32ff7d1 feat(documents): add a document upload token for imports from other systems
A narrow `documents:write` token, minted cookie-only at
`POST /api/tokens/documents` and accepted by the vault upload route alone.
A scoped caller draws on its own hourly bucket per token
(`DOCUMENT_UPLOAD_LIMIT_PER_HOUR`, default 120) and gets a receipt
`{ id, duplicate }` instead of the stored row.

Uploads take optional `sourceSystem` / `sourceId` fields. The source key is
unique per account across live and deleted documents, and the tombstone
purge carries it to a small ledger, so re-sending a document the owner
deleted answers 200 `deleted: true` and stores nothing. `aiRead=defer`
indexes locally and skips the summary and lab staging.

The detail sheet shows where an imported document came from; backup and
restore carry both fields; Delete All Data clears the ledger.

Refs #1038, #938
2026-09-25 21:48:04 +02:00
Marc-André Bombeck e03cf7c2c8 Merge branch 'feat/medication-record-only' into release/v1.39.1 2026-09-25 09:37:27 +02:00
Marc-André Bombeck 94ec9ab932 Merge remote-tracking branch 'origin/release/v1.39.1' into feat/medication-record-only 2026-09-25 09:20:15 +02:00
Marc-André Bombeck b4c2706ec9 feat(medications): keep a medication as a record without tracking intake
A per-medication trackIntake flag (migration 0351, default on for every
existing and new row). With it off the dose, dates and schedule stay stored,
but nothing derives a due dose from them: the reminder worker, the manual
reminder check, the today projector, the auto-miss pass, the low-stock pass,
the doses card, the today list, the outstanding-dose badge, compliance and
its heatmap, the doctor report, the Coach, the BP-status gate, insights,
targets, achievements, the efficacy view and the MCP schedule tool all skip
it.

The medication wire serves such a medication with schedules: [] and the
stored rows in an additive recordedSchedules field, so a client that arms
local reminders from schedules stays silent without an update. Switching
tracking off or back on archives a schedule revision at that instant, the
untracked stretch with an empty payload, so it never counts as missed and
the projector does not put a dose from before the switch back on the card.

A structural guard freezes the set of schedule readers: each one filters on
the flag, derives from dueSchedules, shapes the wire with scheduleWireFields,
or is allowlisted with the reason it derives nothing due. The flag travels
through backup, restore and the medication CSV export.
2026-09-25 08:57:10 +02:00
Marc-André Bombeck 4897752c3c fix(backup): date a restored medication by its earliest record when the file has no date
Portable files exported before v1.39.1 carry no creation date for a
medication, so the restore stamped the restore time. The dose history reads
that date as the day the medication began to exist, and every miss before
it, including the day before the restore, dropped out of the record.

When the file has no creation date, the restore now uses the earliest thing
the file records for the medication: its first dose (scheduled, taken or
written), the start of its first schedule revision, its course start, its
first pause, dose change or side effect, and never a date after the restore.
A file that records nothing about the medication keeps the old default.
2026-09-25 08:53:38 +02:00
Marc-André Bombeck d7bc873691 fix(backup): answer an upload too large to store with 413
An uploaded file whose encrypted copy passes the size one stored backup may
have on this host (a fifth of the heap limit) stopped the store with
BackupBlobTooLargeError, which the route let through as a 500 and reported
to the error tracker. It is now a 413 with the numbers and the remedy in the
message and meta.errorCode backup.upload.too_large, and the refusal is
audited like the others. The store rolls back, so nothing is kept.
2026-09-25 08:51:00 +02:00
Marc-André Bombeck 3abbad048e fix(backup): never run a restore again after its data committed
A restore commits its transaction and then rebuilds the chart tiers. A
worker that stopped during that rebuild left the job running with a stale
heartbeat, and the boot sweep and the admission check treated it like any
interrupted job: the sweep queued it again, so the second run deleted and
re-wrote the account and lost whatever was written in between, and a second
interruption closed it with "rolled back, nothing was changed", which was
false.

The job now records `committedAt` (added to migration 0347, which has not
shipped) and awaits that write before the rebuild starts. The sweep and the
admission check close a committed job as `failed_after_commit`, never queue
it again, and evict the account's caches. The rebuild itself is left to the
nightly and boot passes that already rebuild missing tiers.

The module comment now says what an interrupted restore does (restarted
once, then failed) and what happens to other writes while a restore runs:
new rows are written at once, updates to rows the restore already deleted
wait on their lock until it commits or rolls back.
2026-09-25 08:49:45 +02:00
Marc-André Bombeck c327ae81d5 Merge branch 'feat/procedure-history' into release/v1.39.1 2026-09-25 08:23:34 +02:00
Marc-André Bombeck ad0d50fa28 feat(visits): record procedures and surgeries with a body site
A visit can be filed as a procedure or surgery (new EncounterKind
PROCEDURE) and carry a body site in the person's own words, encrypted at
rest, plus an optional side (LEFT, RIGHT, BOTH). An existing visit
switches to the new kind by an ordinary edit, keeping its date, reason,
outcome and links.

- migration 0349: enum value, laterality type, two nullable columns
- GET /api/encounters/procedures: the DONE procedures, newest first,
  searched after the decrypt over site, side and reason, with body-site
  choices and a total computed over the whole history
- create and edit accept bodySite and laterality on any kind
- /checkups gains a Procedures tab with a body-site filter; the visit
  form offers the site for a procedure and keeps it in view on any
  visit that carries one
- backup and restore carry both fields; the body site is registered as
  ciphertext and rotates with the key
- MCP get_visits narrows by kind and reads the whole record for
  procedures when no window is named; the Coach visit block names a
  procedure's site
- i18n in all seven locales, OpenAPI regenerated

Refs #1025
2026-09-25 08:11:37 +02:00