Commit Graph
4026 Commits
Author SHA1 Message Date
Marc-André Bombeck eda90eeb56 fix(strava): read a dead refresh token from Strava's own fault shape
Strava's token endpoint does not answer RFC 6749 errors. A refresh
token it no longer honours, after the athlete revoked the app or the
token was rotated away, is a 400 with the API's generic Fault:
{"message":"Bad Request","errors":[{"resource":"RefreshToken",
"field":"refresh_token","code":"invalid"}]}. The classifier looked for
invalid_grant, which never arrives, so the failure was booked
persistent and the connection never asked for a reconnect.

The token error now carries the fault reduced to its resource, field
and code (or an RFC error code, should one arrive), and the classifier
lifts a 400 naming RefreshToken to reauth_required, from the error and
from its message after a retry loses the prototype. Every other refusal
is classified by its status as before, including the faults that name
the Application.

Strava documents the Fault and Error model but not these values; the
body is the one several unrelated client libraries captured from live
traffic between 2023 and 2026.
2026-10-22 07:31:15 +02:00
Marc-André Bombeck d396945f44 fix(api): publish the backup upload
POST /api/admin/backups/upload stores a backup file as a new copy, the
copy whose id the published restore takes, and it refuses a file for
reasons an operator has to be able to look up: a key this server does
not hold (backup.key.missing, with the key ids), an owner account that
does not exist here, a newer schema, a copy too large to store
(backup.upload.too_large). It was exempted from the contract as console
plumbing while its two siblings were published for exactly that kind
of refusal.

It is registered with the three bodies it reads (raw JSON, raw gzip, a
small multipart form) and every status it answers; the summary is the
three identity fields plus one integer count per class, so a class the
backup format gains later does not break a decoder. The round-trip
test calls it through the contract now.
2026-10-22 07:08:02 +02:00
Marc-André Bombeck 579789ec38 fix(api): declare the 400 and 415 the single-value profile writes answer
The six /api/auth/me scalar writes (unit preference, glucose unit,
automatic document reading, local lab OCR, workout routes, the central
Codex switch) read their body through safeJson with a 1 KB cap, so each
answers 415 for a body that is not JSON by content type and 400 for one
that does not parse, beside the 413 they already declared. Their
descriptions said so and the responses did not. All three now come from
one block.

The modules and disable-coach route tests had been skipping the
contract check over a 400 and a 409 the registry already declares; the
skips are gone.
2026-10-22 07:07:46 +02:00
Marc-André Bombeck 5ca3994523 fix(api): declare the FHIR refusals as the OperationOutcomes they are
A /api/fhir/* handler answers its own refusals as FHIR: a bad search
parameter is a 400 OperationOutcome, the hourly fhir bucket a 429
OperationOutcome (issue code throttled), both served as
application/fhir+json, the same way the 404 on a read already was. The
contract declared no 400 and the generic JSON 429 for the 429, and no
403 for the doctorReport module gate, which every data route runs.

The searches now declare the 400, every data route the 403
module.disabled envelope and the FHIR 429 with the rate-limit headers
apiHandler attaches to it. The module gate keeps answering the JSON
envelope: it is the errorCode every client already branches on for a
disabled module, and it runs before the FHIR face does. The route tests
drop their skips and assert the 429's content type and Retry-After.
2026-10-22 07:07:34 +02:00
Marc-André Bombeck c272324c1e fix(api): declare the auth gate's 403 on every operation behind it
requireAuth answers 403 auth.scope.insufficient to a narrow Bearer token
on a route that names no scope it holds, and requireAdmin answers 403
auth.admin.required to a session that is not an administrator's. Both
run before any route body, and the contract only said so in the prose
of the shared 401, so a client generated from it had no typed branch
for either. The route kit accepted the scope refusal on any operation
that declared a 401 for the same reason.

The 403 is added to the assembled path table rather than to
stdResponses. That set is spread into most operations, about three
hundred of them carry a 403 of their own, and most spread the set after
it, so a shared 403 there would have overwritten every module-off and
sharing refusal in the document. withScopeRefusal adds the shared
response where an operation has none and prefixes an operation's own
403 with the gate's code, keeping the sharing sentence last. Operations
that take no credential, and the three surfaces that authenticate by a
credential of their own, are left as they were.

The kit no longer tolerates the refusal on an operation's behalf, and a
guard holds every operation behind the gate to declaring it.
2026-10-22 07:07:19 +02:00
Marc-André Bombeck 73362dc0ae chore(deps): take the weekly production and development updates
Production: the AWS SDK S3 client and lib-storage 3.1152.0, Prisma
(client, adapter-pg, CLI) 7.10.1, TanStack Query 5.104.3 and Virtual
3.14.21, dotenv 18.0.8, jspdf-autotable 5.0.9, lucide-react 1.59.0,
nodemailer 10.1.2, pg-boss 12.38.0, React and React DOM 19.3.1 (still
exact) and undici 8.12.

React 19.3.1 and undici 8.12.2 are security releases. Prisma 7.10.1
stops a nested interactive transaction from leaking its id into a
later top-level one.

pg-boss moves its schema from 45 to 46; the worker applies the
migration on start and the index builds continue in the background.
Its list and delete helpers now page and batch, which touches only the
queue retirement at boot, and that is idempotent. The retention test
pins the installed version, so it moves to 12.38.0 after re-checking
every source line it asserts.

Development: @axe-core/playwright 4.14.0, Playwright 1.64.1, Vitest and
its coverage provider 5.0.5, shadcn 4.22.0. The Stryker runner patch
still applies; it touches the runner's own name join, and 5.0.5 changes
nothing in how Vitest builds a test's full name. axe-core 4.14 turns on
label-content-name-mismatch for the WCAG 2.1 A tag the a11y specs run.

The S3 client is held on the same release as lib-storage rather than
the newest one its range allows, so the two share one SDK core.

Vite gets a floor at 8.1.6 for GHSA-587h-7wmj-h5pm and four sibling
advisories against its dev server and bundled launch-editor. It arrives
only under Vitest and never reaches the image.

The image's separate Prisma CLI install moves with the app tree to
7.10.1, and its dotenv to 18.0.8, which it had trailed by a patch.
2026-10-22 06:53:04 +02:00
Marc-André Bombeck ae2636c9e5 Merge branch 'release/v1.45.0' into feat/v145-testkit
# Conflicts:
#	src/app/api/tokens/__tests__/route.test.ts
2026-10-22 06:08:47 +02:00
Marc-André Bombeck 1915f91526 test(insights): pin the clock in the two-service workout collapse case
The case built its sessions from the real clock: one copy a day before
now, the other 30 s later. The cross-source workout picker groups sessions
into fixed five-minute slots of the epoch, so whenever the suite ran in
the last 30 s of a slot the two copies landed in different slots and
counted twice. It had nothing to do with day boundaries or time zones: the
outcome followed the minute of the wall clock alone.

The case now pins Date to an instant well inside a slot. With the pin at
12:04:45Z or 23:59:45Z the case failed under UTC, Europe/Berlin and
Pacific/Kiritimati alike; at the committed 12:02:00Z it passes under all
three.

The production code reads no clock here (the block takes `now` from its
caller). What the flake exposed is the fixed slot grid itself: two copies
of one session that straddle a slot edge are not collapsed. That is a
change to the picker every workout surface shares, so it is left for a
change of its own.
2026-10-22 05:58:45 +02:00
Marc-André Bombeck 4f5adb4fae fix(units): show zero rather than negative zero after a unit conversion
A converted value that rounds to zero from below came out as -0, and
Intl.NumberFormat prints that as "-0": 0 °F typed and shown back read
"-0 °F", and a body-temperature deviation of a few hundredths below zero read
"-0.0 °F". The rounding now returns plain zero. Found by the new unit
round-trip properties, which check that every value a person can type in
their own unit is shown back exactly as typed.
2026-10-22 05:32:49 +02:00
Marc-André Bombeck 4ff3f3eb5d test: property tests for zones, statistics, cadence, crypto and backups
fast-check properties with one shared configuration (tests/property/): a
fixed seed on every pull request, a fresh one and more cases at night through
FC_SEED and FC_NUM_RUNS, and a printed seed with the shrunk counterexample on
failure.

- Time zones: wall clocks agree with Intl in twenty awkward zones, a wall
  clock maps back to an instant showing it, a skipped hour resolves forward
  on the same day, every instant lies inside the window of the day it is
  filed under, and day keys shift and count as inverses.
- Statistics: every median in the tree says the same number, medians and
  spreads obey order, shift and scale, a least-squares fit recovers an exact
  line and composes from stored sums exactly, and the segmented regression
  recovers a noiseless interrupted line.
- Cadence and compliance: weekly and daily schedules expect exactly what a
  day-by-day oracle expects, in any zone and on transition days, and the
  rate stays within bounds and never falls when a missed dose is taken.
- Encryption: every codec opens what it sealed under the key it names,
  rotation moves the key id and nothing else, and a tampered value never
  opens to anything but the sealed bytes.
- Backups: randomly generated accounts come back from a disaster-recovery
  restore with an identical canonical dump of every generated table.
2026-10-22 05:32:48 +02:00
Marc-André Bombeck 26df61f638 test(integration): drive the Strava sync against Postgres
The Strava writer had eight mocked test files and no test against a
database. strava-sync.test.ts runs the real sync behind a fake Strava API at
the safeFetch boundary: field mapping, the after= watermark, idempotent
re-sync on the (user, source, external id) key, in-place overwrites that keep
what only the detail read carries, a cursor that never moves backwards or
past a row that failed to write, the paged backfill with its resume point
and requeue, token refresh with both rotated tokens stored sealed, and the
integration ledger after transient and permanent failures. The sync, the
disconnect and the credential routes are covered through the kit.

The mocked cases that asserted call counts and mock ordering are removed;
the pure retry-after parsing stays a unit test.
2026-10-22 05:32:09 +02:00
Marc-André Bombeck f3d7ab31e2 test(guards): make path-pinned source reads fail when their subject moves
A test that reads a source file by path and asserts an absence
(`expect(source).not.toMatch(…)`) stays green after a split: the code it
watched moved next door and the old path no longer holds it. A missing file
throws; a file that kept its name but lost its contents does not.

- `readSource(path, anchors)` in helpers/source-files.ts reads one file and
  requires every anchor (a string or pattern the watched code carries) to
  match at least once; it throws on a missing file, a lost anchor, or a read
  without an anchor.
- `readSourceFolder(dir, { floor })` is the folder-scan form for a subject
  that was split into several files.
- The twelve reads that were asserted only negatively now go through
  `readSource` with an anchor: the batch route, the integration-sync
  registrar, the dashboard client, the mood insights client, the sleep
  overview and sleep page, the sidebar, the baseline form, the account
  section (two guards), api-handler's requireAuth and the Google Health sync.
- The two schema parsers the wipe and enum guards share now refuse a parse
  of the real schema that finds fewer than 50 models (and 10 enums), so a
  moved file or a drifted block regex cannot leave those guards comparing
  an allowlist against nothing. Synthetic schemas a test writes stay exempt.

Proof: renaming `setSaving` in the baseline form made the converted
confirm-failure guard throw "the file no longer contains setSaving"; the
helper's own test plants a missing file, a lost string anchor, a lost regex
anchor, an empty anchor list and an under-floor folder, each of which throws.
2026-10-22 04:29:35 +02:00
Marc-André Bombeck c86c7d1a79 refactor(lint): enforce the lib → components and client → server boundaries
Add the in-repo rule `healthlog/import-boundaries`:

- a file under src/lib may not import src/components or src/app (alias,
  relative, re-export and dynamic forms, type-only included);
- a "use client" file may not make a value import of the database client,
  the crypto module, the Prisma client entry, the job queue, pg, pg-boss or
  next/headers. Type-only imports and the Prisma enums entry stay legal.

The four lib files that still import upward are listed in the rule's allow
map with a reason each; a listed file that stops importing upward is
reported, so the map can only shrink.

Five of the nine upward imports are gone by moving pure modules to their
layer, without behaviour change:

- supply-runway estimate → src/lib/medications/supply-runway.ts
  (read by the low-stock job and the medication list read);
- weekday BYDAY tokens → src/lib/medications/scheduling/weekday-tokens.ts
  (read by the medication extraction prompt);
- settings section slugs → src/lib/settings/section-slugs.ts
  (read by the record-settings classification);
- the command palette index → src/components/command-palette/ (it is a
  client index built from component registries).

Proof the rule can fail: an import of @/components/ui/card appended to
src/lib/medications/supply-runway.ts reported libUpward, and a planted
"use client" file importing @/lib/db reported clientServerOnly; both were
removed again.
2026-10-22 04:15:11 +02:00
Marc-André Bombeck ebdb63f0d8 perf(insights): keep Zod off the first load of the metric pages
The value domain read the plausibility band out of the measurement
validation module, so every metric sub-page that asks whether a metric
can be negative or is integer-valued loaded the measurement schemas and
Zod with them. The band and its check live in a Zod-free module now,
re-exported by the validation module for the server writers, and the
values list checks its segment against the exhaustive type label map
instead of the Zod enum. About fifty metric routes drop roughly 88 KB
gzip from their first load. The client-route guard walks a metric page
and the values list too.
2026-10-22 01:36:06 +02:00
Marc-André Bombeck 832a9da98a test(backup): give the activity goals a valid fill in the settings round trip
The restore admits activity goals key by key against the goals schema,
so the generic { roundTrip } JSON fill was refused as an unknown goal
rather than carried. Fill the column with real goals and pin the
per-goal admission (valid goals kept, unknown keys and out-of-bounds
goals named) in the unit suite.
2026-10-22 01:12:17 +02:00
Marc-André Bombeck 663b8756a6 docs(import): say why lab CSV duplicates are cut on the read zone's day
A wall-clock time read in another zone on a retry is a different
instant, so neither an exact-instant match nor the zone's day catches
it near midnight, and widening the match would drop a genuine reading
of the same value on the neighbouring day. The earlier import's zone is
not stored, so the comment states the rule that never loses a reading.
2026-10-22 00:40:08 +02:00
Marc-André Bombeck 13039eb430 fix(import): write an imported medication and its category together
The medication CSV import created the medication and then set its
category in a second write. A crash between the two left a medication
without a category, and a retry skipped it as a duplicate, so it never
got one. Both writes now share one transaction.
2026-10-22 00:39:59 +02:00
Marc-André Bombeck bd811eb753 test(crypto): follow a pushed payload array into the write that sends it
The lab CSV import builds its rows into an array and writes each chunk
with one createMany({ data: toWrite }). The ciphertext-writer scan only
read payload literals at the call site, so it never saw the encrypted
note that write carries; the column stayed covered only by the name
scan. The scan now follows an identifier payload into the literals the
same file pushes onto it, and asserts it sees the chunked note write.
2026-10-22 00:38:03 +02:00
Marc-André Bombeck 08ea2b6620 fix(import): keep a failing audit write from replacing the import's answer
The CSV import wrote its audit row in a finally block, so an audit write
that threw discarded whatever the import had settled on: the result of
a finished import, the 413 of a file over the cap, or the error of one
cut off part way. The failure is now noted on the wide event and the
import answers as it would have.
2026-10-22 00:35:35 +02:00
Marc-André Bombeck e91957c017 fix(labs): word a three-year projection horizon as the cap it is
The beyond-horizon line said the range held "for more than {years}
years, the span your readings cover", but the horizon is capped at three
years, so a ten-year history was told its readings spanned three. The
trend now says whether the cap or the span set the horizon
(`horizonCapped`), and the card words each case on its own in every
locale.
2026-10-22 00:32:13 +02:00
Marc-André Bombeck 6330908619 fix(mcp): run detect_changepoints on the insights level-shift detector
The tool kept its own CUSUM with a plain standard-deviation bar, so the
per-metric floors and the drift rejection the health-status scan gained
never reached it, nor the medication-effect note that reads it: a 0.6 kg
weight step or a steady climb still came back as a dated shift. The tool
now segments the series with the shared detector, recursing on each side
of a shift with the same bar and the metric's floors. The output shape
is unchanged.
2026-10-22 00:29:19 +02:00
Marc-André Bombeck 4fbbdb12c2 fix(fhir): page _offset as far as a series reaches
The 100000 ceiling refused offsets a correctly paging client reaches on
its own: an Observation series with a heart-rate history runs well past
a hundred thousand rows, and the next link the server handed out led
straight into a 400. The 500 the ceiling was added for came from an
offset such as 1e20 that no longer floors to an exact integer and that
the database cannot read as an OFFSET. The refusal now sits at the
largest exact integer, and a next link never carries an offset the
server would refuse.
2026-10-22 00:27:02 +02:00
Marc-André Bombeck 29d6029999 fix(workouts): read a day with activity data and no workout as rest
The strain run writes no impulse row on a day without a scorable workout
or active energy, so a rest day for someone without daily active energy
was never rated: fitness and fatigue held for months instead of
decaying, and the figures named the last stored day while the coverage
count ended there too.

A day without a stored impulse is now classified from the underlying
data: a workout on the day leaves it unrated, steps, heart rate or
active energy without a workout make it rest, and no data at all leaves
it unrated. The series runs to the day the strain run scores, so a
stretch without data after the last rated day shows in the coverage
count, and the card names the last rated day when it lies further back
than the day before.
2026-10-22 00:25:29 +02:00
Marc-André Bombeck 0918451e02 fix(settings): unlist Preview features until the topic pages ship
The switch was stored and shown, but nothing reads the topics flag
yet, so the page promised a change it could not make. The section,
its nav entry, its loader and its copy are gone, so its palette
entry goes with them; /settings/preview is no longer a route. The
stored flag, /api/settings/preview-features and its backup round-trip
stay, and the column's pending-consumer note says why.
2026-10-22 00:09:40 +02:00
Marc-André Bombeck 176f21ab78 fix(fhir): bound _offset and answer a larger one with 400
An offset beyond what the database can skip reached Prisma unchecked
and answered 500. Every search route now refuses an _offset above
100000 with an invalid OperationOutcome.
2026-10-22 00:01:27 +02:00
Marc-André Bombeck 896ba233da fix(import): refuse unknown query parameters on the CSV imports
The lab, medication and measurement CSV routes ignored parameters they
did not know, so a misspelt dryrun=1 fell back to a real import and
wrote the file the caller meant only to check. Their query schemas are
strict now: an unknown parameter answers 422 before anything is read
or a rate bucket is spent.
2026-10-21 23:56:16 +02:00
Marc-André Bombeck f8c17ee9bb fix(import): write lab CSV rows one chunk at a time and audit cut-off imports
Every accepted row was its own insert, so a 20 000-row file meant
20 000 round trips and an import cut off part way left an arbitrary
prefix behind. Each 200-row chunk is now one createMany: it lands whole
or not at all, and uploading the same file again skips the written
chunks as duplicates. The importers report each committed write, and
the audit row is written in a finally block, marked partial with the
rows written when the import did not finish.
2026-10-21 23:49:23 +02:00
Marc-André Bombeck b828870e1b fix(import): cut lab CSV duplicate days in the zone the file is read in
The rows were parsed in the query's timezone while the duplicate keys
used the account's, so two draws on separate days of the file's zone
could collapse into one, or one day split in two.
2026-10-21 23:42:34 +02:00
Marc-André Bombeck bb6982aea2 feat(report): name the analysed window of each medication effect
The effect is fitted on up to 90 days before a start and 180 after
it, which can lie outside the report period. The PDF notes and the
clinician view now state the fitted window for every effect shown.
2026-10-21 23:37:09 +02:00
Marc-André Bombeck cfe5e2d3c6 fix(report): release the medication effect only with the medication list
The effect block names every medication it describes and its
confounders, so a report or share link that withheld the medication
list still carried the names. The aggregator now loads the block only
when both leaves are admitted, the clinician view checks the list leaf
as well, and the leaf label says it needs the list.
2026-10-21 23:31:58 +02:00
Marc-André Bombeck 733b00ee1a fix(strain): count one source per session and per day
Two rows of one workout slot from sources off the ladder were both
kept by the picker and their impulses added. Only one source's rows
now count per slot, a source off the ladder ranking below every
listed one. The day's active energy, the strain fallback signal,
summed every source; it now goes through the activeEnergy source pick
and keeps one source's total.
2026-10-21 23:25:45 +02:00
Marc-André Bombeck cfd7c18d48 fix(medications): widen the medication-effect intervals to a week of lag
The automatic Newey-West rule gives a lag of 3 on 30 to 270 daily
values, which leaves most of a physiological series' carry-over out of
the intervals. The lag is now at least 7. Reference values are
recomputed with statsmodels at the new default, and the lag-3 values
stay pinned with an explicit lag. A fit whose residual autocorrelation
exceeds 0.5 is flagged, and the card, the clinician view and the PDF
say the ranges may still be too narrow.
2026-10-21 23:20:28 +02:00
Marc-André Bombeck 99dfd68aad fix(workouts): hold training load through unscored days
A day without a stored training impulse was read as a rest day, so a
watch left off or a nightly run that had not happened yet pulled
fitness and fatigue toward zero. Such a day is now not rated: the
averages hold through it, the series marks it, and the card says how
many of the last 42 days were rated. A scored day of 0 stays rest. The
figures describe the last stored day rather than always yesterday.
2026-10-21 23:09:09 +02:00
Marc-André Bombeck 2723ac5b98 fix(insights): keep plateaus and drifts out of the level-shift scan
Each scanned vital gets a minimum level change and a spread floor at
about its clinical and device resolution, so a VO2 max estimate that
steps by 0.3 or a clean 2 bpm change no longer reads as a shift. A
series a straight line explains at least as well as a step is a drift,
not a dated shift. The magnitude is capped at 10 so the flattest series
cannot win the ranking.
2026-10-21 23:03:03 +02:00
Marc-André Bombeck 89b30ebdee fix(activity): never rate today's partial day in the activity calendar
Today is shown as in_progress instead of being placed against whole
days, and a running period is compared over its completed days only:
the total through yesterday against the usual rate times the days
completed. The period total and goal progress still count today. The
comparison gains completedDays and completedValue.
2026-10-21 22:47:07 +02:00
Marc-André Bombeck e482f76508 fix(labs): stop projecting lab trends from stale or short series
A marker whose newest reading is more than a year old is now reported
as of that reading (projection "stale"), with no exit date and no
already-outside verdict. The projection horizon is capped at the span
the readings cover, so a line is never carried further ahead than the
data reaches back. The detail read keeps the newest 2000 readings
rather than the oldest.
2026-10-21 22:40:43 +02:00
Marc-André Bombeck 67d04630c3 Merge branch 'feat/v144-analysis' into release/v1.44.0 2026-10-21 22:27:59 +02:00
Marc-André Bombeck 6320c54edd feat(insights): look for level shifts in thirteen vitals over 180 days
The health-status read scanned five vitals over 90 days for a dated,
sustained level shift. It now scans every vital with a stable daily level
(adding RMSSD, diastolic pressure, pulse, body fat, respiratory rate,
oxygen saturation, walking heart rate and VO2 max) over 180 days, reads one
value per day per metric, leaves a metric unread when its module is off,
and reports how many days stand on each side of the break. The Coach keeps
its five-metric, 90-day scan unchanged.
2026-10-21 22:27:20 +02:00
Marc-André Bombeck aa899a9d54 Merge branch 'feat/v144-userneeds' into release/v1.44.0
# Conflicts:
#	src/__tests__/sharing-surface-guard.test.ts
#	src/__tests__/workout-canonical-identity-guard.test.ts
2026-10-21 22:24:01 +02:00
Marc-André Bombeck 121588e3dc feat(settings): map and check a lab or medication CSV before importing
Settings > Export & Import gains a card that reads the head of the file,
suggests the column for each field from its header in eight languages,
suggests the separator, decimal mark and date order, and lets every
choice be corrected. The check lists each refused row by line and the
markers the names land on; the import button names how many rows it
will write. Templates for both kinds download from the sheet.
2026-10-21 22:19:16 +02:00
Marc-André Bombeck 4e71cf4dc2 Merge branch 'feat/v144-report' into release/v1.44.0 2026-10-21 22:18:50 +02:00
Marc-André Bombeck a84fb4b467 feat(import): import lab results and medications from CSV
Two streamed endpoints read a spreadsheet record by record with a
column mapping from the query: separator, decimal mark, date order and
zone are stated, never guessed per row. Lab rows resolve to markers the
way scanned reports do, convert units where the conversion is known and
keep what the file said; medication rows map name, dose, daily times,
as-needed and a dated window, checked against the create schema, with
reminders off unless asked for. A dry run writes nothing, a re-upload
only finds duplicates, and every refused row comes back with its line
and reason.
2026-10-21 22:17:59 +02:00
Marc-André Bombeck 9be720146c feat(workouts): show fitness, fatigue and form from the stored training impulse
The first page of the workout list now carries the fitness-fatigue model
over the day-total heart-rate impulse the nightly strain run already
stores: fitness as the 42-day and fatigue as the 7-day exponentially
weighted average, form as their difference. A day without a stored impulse
counts as rest. It needs 28 days and three training days, flags the first
six weeks as warming up, and reads in the person's own units only. The
workouts page shows the three figures above the list.
2026-10-21 22:13:28 +02:00
Marc-André Bombeck 5c64192afc feat(mental-health): measure screener change against the meaningful-change threshold
The assessments list now carries, per PHQ-9, GAD-7 and WHO-5, the latest
total against the previous and the first administration, classified
against the change studies treat as meaningful: 5 points on the PHQ-9,
4 on the GAD-7, 10 on the WHO-5 percentage scale. A smaller change reads
as within the threshold rather than better or worse. The instrument
detail states each change and whether it reaches that size, in neutral
words. The read takes totals and dates only, never an answer.
2026-10-21 21:59:42 +02:00
Marc-André Bombeck c94766efc3 feat(measurements): show where a metric's values come from
A read-only view per metric and UTC day: every source with readings, its
day value, its place in the person's source priority, and which source
the charts use with the reason. A second card lines two sources up over
30, 90 or 365 days. The pick is explained from the rank the canonical
SQL returns, so the page cannot disagree with the charts. Linked from
the metric pages and from Settings > Source priority.
2026-10-21 21:57:05 +02:00
Marc-André Bombeck 77619f8aa5 feat(fhir): serve Observations as a time series, code RMSSD and workouts
GET /api/fhir/Observation keeps its snapshot answer when no date is
sent. A date range (FHIR prefixes eq/gt/ge/lt/le, UTC when no offset)
switches it to the time series: every reading in the range plus
workouts, newest first, paged in the database through one UNION id
query and a count, so a page costs what it holds. Series ids are the
row's own (m-<id>, w-<id>) and read back through /Observation/{id}.
The series replays the same saved report selection as the snapshot,
pairs systolic and diastolic recorded at one instant into the
blood-pressure panel, leaves sleep stage segments out, and reads an
hourly heart-rate bucket as a mean over its hour. A code parameter
narrows either answer; a malformed date is a 400 OperationOutcome.

A workout is an activity Observation after the Physical Activity IG:
LOINC 73985-4 with the sport as its value and duration (55411-3) and
energy (41981-2) as components. RMSSD gets its own registry coding,
text-only because LOINC has no RMSSD term, so it never borrows the SDNN
code. The capability statement lists the two new parameters.
2026-10-21 21:56:16 +02:00
Marc-André Bombeck 9e2a0681b2 feat(doctor-report): add sleep, HRV, steps, workouts and the medication effect
The standard report template now carries sleep duration, heart-rate
variability as two labelled rows (SDNN and RMSSD), daily steps, a
per-sport workout summary and the change around each medication start.
Each still rides its module, and the template is still only applied by
the button that names it; saved selections and share links are
untouched.

Two structured leaves join the catalogue: WORKOUTS (activity group,
workouts module) and MEDICATION_EFFECT (medications group). The workout
block reads narrow rows through the canonical-workout picker and sums
them per sport. The effect block reuses the efficacy loader with the
report's end as its horizon, carries a target only when that target's
own measurement leaf is admitted, and is capped at eight medications.

In the PDF the wearable series chart at half width, two to a row, in
the units the table prints; the workout and effect blocks are compact
tables with short notes. The clinician view renders both blocks from
the same payload. RMSSD joins the dense day-bucket path so long windows
stay aggregated.
2026-10-21 21:55:57 +02:00
Marc-André Bombeck 2ba6214a65 feat(labs): show each marker's slope and where the line would leave the range
The biomarker detail read now carries a trend: the least-squares line
through every numeric reading of the marker (all stored in its unit), with
the slope's 95 % interval and p-value. It needs three readings over at
least a year. The line is placed against the marker's band, and an exit
date is given only when the interval excludes zero, the line is inside the
band today and reaches a bound within three years. The detail page words
it as a straight-line projection, not a forecast.
2026-10-21 21:51:36 +02:00
Marc-André Bombeck 1cf0582603 feat(medications): show the change at the start as a segmented fit
The efficacy tab keeps its before/after comparison and gains, per metric
target, the level change and the change in weekly trend at the start,
each with a 95 % interval. The fit covers up to 90 days before and 180
after the start and ends before the first dose change. After the start,
days are left out when fewer than 80 % of the doses of the preceding 14
days were taken (cadence-aware, from the dose ledger) or when the
medication was paused or between courses. Other medications that
started, stopped, changed dose or paused inside the window are listed.
Below 14 days with readings across 21 days on either side the view says
what is missing instead of showing numbers.

The efficacy response gains a nullable segmented block per target.
2026-10-21 21:50:27 +02:00
Marc-André Bombeck cb8ed92d78 feat(stats): add segmented regression with Newey-West intervals
A four-parameter interrupted time series fit (pre-trend, level change,
slope change) by OLS, with a Bartlett-kernel HAC covariance, the n/(n-k)
small-sample factor and Student t intervals. The tests pin the
coefficients, standard errors and intervals to independently computed
reference values on contiguous and gapped series.
2026-10-21 21:44:29 +02:00