Merge remote-tracking branch 'origin/main' into wip/v140-E

This commit is contained in:
Marc-André Bombeck committed 2026-10-03 18:56:39 +02:00
commit f3ccc809a8
28 files changed
+891 -38

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@@ -12,6 +12,7 @@ import {
handleFilePickerChange,
OcrPageCoverageNote,
OcrReviewDialog,
unitSkippedAnalytes,
} from "../ocr-review-dialog";
const hookState = vi.hoisted(() => ({ extractPending: false }));
@@ -223,3 +224,40 @@ describe("<OcrPageCoverageNote> — a long PDF read from its first pages", () =>
expect(html).toBe("");
});
});
describe("unitSkippedAnalytes", () => {
const unit = (analyte: string) => ({
analyte,
reason: "unit_mismatch" as const,
});
it("is null when nothing was skipped for a unit", () => {
expect(unitSkippedAnalytes([])).toBeNull();
expect(
unitSkippedAnalytes([{ analyte: "LDL", reason: "duplicate" }]),
).toBeNull();
});
it("names the analytes skipped for a unit, ignoring duplicates", () => {
expect(
unitSkippedAnalytes([
{ analyte: "LDL", reason: "duplicate" },
unit("Glucose"),
unit("Creatinine"),
]),
).toBe("Glucose, Creatinine");
});
it("lists three and counts the rest, once each", () => {
expect(
unitSkippedAnalytes([
unit("A"),
unit("A"),
unit("B"),
unit("C"),
unit("D"),
unit("E"),
]),
).toBe("A, B, C +2");
});
});
@@ -1,9 +1,11 @@
import { describe, expect, it } from "vitest";
import type { OcrReviewRow } from "../ocr-review-types";
import { seedReviewRows } from "../ocr-review-types";
import {
collectRowErrors,
planSave,
readingUnitDiffers,
toCommitRow,
validateReviewRow,
} from "../ocr-review-validation";
@@ -21,6 +23,7 @@ function row(overrides: Partial<OcrReviewRow> = {}): OcrReviewRow {
takenAt: "2026-06-10",
confidence: { analyte: 1, value: 1, unit: 1, range: 1 },
biomarkerMatch: "existing",
markerUnit: "mmol/L",
duplicateOf: null,
confirmed: true,
...overrides,
@@ -140,3 +143,72 @@ describe("planSave", () => {
}
});
});
describe("a reading in another unit than its marker's", () => {
it.each([
["the same unit", { unit: "mmol/L" }, false],
["the same unit, spelled differently", { unit: "mmol/l" }, false],
["a different unit", { unit: "mg/dL" }, true],
["a different magnitude of the same substance", { unit: "µmol/L" }, true],
["a new marker (no unit yet)", { unit: "mg/dL", markerUnit: null }, false],
["no unit stated", { unit: "", markerUnit: "mmol/L" }, false],
[
"a qualitative result",
{ value: null, valueText: "negative", unit: "mg/dL" },
false,
],
] as const)("%s → differs: %s", (_name, overrides, differs) => {
expect(readingUnitDiffers(row(overrides))).toBe(differs);
});
it("is a blocking error on the unit field, distinct from a missing unit", () => {
expect(validateReviewRow(row({ unit: "mg/dL" }))).toEqual({
unitMismatch: true,
});
expect(validateReviewRow(row({ unit: "" }))).toEqual({ unit: true });
});
it("cannot be turned into a payload, whatever its other fields say", () => {
expect(toCommitRow(row({ unit: "mg/dL" }))).toBeNull();
expect(toCommitRow(row({ unit: "mmol/l" }))?.unit).toBe("mmol/l");
});
it("blocks the whole save when it is selected, and not when it is not", () => {
expect(
planSave([row({ key: "a" }), row({ key: "b", unit: "mg/dL" })]),
).toEqual({ kind: "blocked" });
const plan = planSave([
row({ key: "a" }),
row({ key: "b", unit: "mg/dL", confirmed: false }),
]);
expect(plan.kind).toBe("ready");
expect(
collectRowErrors([row({ unit: "mg/dL", confirmed: false })]).size,
).toBe(0);
});
it("starts unselected on the review screen, like a duplicate, so it is a choice", () => {
const dto = (unit: string, markerUnit: string | null) => ({
analyte: "Glucose",
value: 5.6,
valueText: null,
unit,
referenceLow: null,
referenceHigh: null,
referenceText: null,
takenAt: "2026-06-10",
confidence: { analyte: 1, value: 1, unit: 1, range: 1 },
biomarkerMatch: "existing" as const,
markerUnit,
duplicateOf: null,
});
const [same, other, fresh] = seedReviewRows(
[dto("mmol/L", "mmol/L"), dto("mmol/L", "mg/dL"), dto("mmol/L", null)],
null,
);
expect(same.confirmed).toBe(true);
expect(other.confirmed).toBe(false);
expect(other.markerUnit).toBe("mg/dL");
expect(fresh.confirmed).toBe(true);
});
});
@@ -18,6 +18,7 @@ const baseRow: OcrReviewRow = {
takenAt: null,
confidence: { analyte: 1, value: 1, unit: 1, range: 1 },
biomarkerMatch: "existing",
markerUnit: "mmol/L",
duplicateOf: null,
confirmed: true,
};
@@ -115,3 +116,42 @@ describe("<OcrRowEditor> layout", () => {
}
});
});
describe("<OcrRowEditor> unit differs from the marker's", () => {
const mismatched: OcrReviewRow = {
...baseRow,
takenAt: "2026-06-10",
unit: "mg/dL",
markerUnit: "mmol/L",
};
it("says so before any save attempt, in calm wording", () => {
const html = render(undefined, "en", mismatched);
expect(html).toContain("Tracked in mmol/L; this report says mg/dL");
expect(html).not.toContain('aria-invalid="true"');
expect(html).not.toContain('role="alert"');
});
it("marks the unit field and names the marker's unit once a save was refused", () => {
const html = render({ unitMismatch: true }, "en", mismatched);
const invalid = html.match(/<input[^>]*aria-invalid="true"[^>]*>/g) ?? [];
expect(invalid).toHaveLength(1);
expect(invalid[0]).toMatch(/id="[^"]*-unit"/);
expect(html).toContain("This marker is tracked in mmol/L.");
});
it("shows nothing when the units agree, however they are spelled", () => {
const html = render(undefined, "en", { ...mismatched, unit: "mmol/l" });
expect(html).not.toContain("Tracked in");
});
it("shows nothing for a new marker, which adopts the row's unit", () => {
const html = render(undefined, "en", { ...mismatched, markerUnit: null });
expect(html).not.toContain("Tracked in");
});
it("speaks German too", () => {
const html = render(undefined, "de", mismatched);
expect(html).toContain("Geführt in mmol/L; dieser Befund nennt mg/dL");
});
});
+39 -6
View File
@@ -19,6 +19,7 @@ import { toastWrittenOutcome } from "@/components/outcome/outcome-toast";
import { Button } from "@/components/ui/button";
import { ResponsiveSheet } from "@/components/ui/responsive-sheet";
import { ApiError } from "@/lib/api/api-fetch";
import type { OcrSkippedRowDto } from "@/lib/validations/labs-ocr";
import { EncounterSuggestionField } from "@/components/encounters/encounter-suggestion-field";
import { useTranslations } from "@/lib/i18n/context";
@@ -53,6 +54,25 @@ export function handleFilePickerChange(
if (file) onFilePicked(file);
}
/**
* The analytes the commit skipped for a unit other than their marker's, as one
* short phrase for a toast (the first three, then a count), or null when none.
*/
export function unitSkippedAnalytes(
skipped: readonly OcrSkippedRowDto[],
): string | null {
const names = [
...new Set(
skipped
.filter((row) => row.reason === "unit_mismatch")
.map((row) => row.analyte),
),
];
if (names.length === 0) return null;
const shown = names.slice(0, 3).join(", ");
return names.length > 3 ? `${shown} +${names.length - 3}` : shown;
}
/**
* Translate an extract failure into a friendly, error-code-aware message.
* Refusals are read by `meta.errorCode`: a 403 is a missing consent only when
@@ -241,19 +261,32 @@ export function OcrReviewDialog({
// used to be green on any 200 and print the count regardless; the
// server resolves the outcome from the two lists and the dialog
// renders it.
// A row skipped for its unit is the one the person has to act on, so
// when there is one the message names it; the plain "already
// recorded" wording would be wrong for it.
const unitSkipped = unitSkippedAnalytes(result.skipped);
toastWrittenOutcome(
result.outcome,
result.outcome === "success"
? t("labs.ocr.savedToast", { count: result.inserted.length })
: result.outcome === "partial"
? t("labs.ocr.savedPartialToast", {
count: result.inserted.length,
skipped: result.skipped.length,
})
: result.outcome === "failed"
? t("labs.ocr.savedNothingToast", {
? unitSkipped
? t("labs.ocr.savedPartialUnitToast", {
count: result.inserted.length,
analytes: unitSkipped,
})
: t("labs.ocr.savedPartialToast", {
count: result.inserted.length,
skipped: result.skipped.length,
})
: result.outcome === "failed"
? unitSkipped
? t("labs.ocr.savedNothingUnitToast", {
analytes: unitSkipped,
})
: t("labs.ocr.savedNothingToast", {
skipped: result.skipped.length,
})
: t("labs.ocr.savedEmptyToast"),
);
onCommitted();
+19 -2
View File
@@ -7,6 +7,8 @@
*/
import type { OcrExtractedRowDto } from "@/lib/validations/labs-ocr";
import { readingUnitDiffers } from "./ocr-review-validation";
export interface OcrReviewRow {
/** Stable client key for the list (the analyte+index at seed time). */
key: string;
@@ -22,6 +24,11 @@ export interface OcrReviewRow {
takenAt: string | null;
confidence: OcrExtractedRowDto["confidence"];
biomarkerMatch: "new" | "existing";
/**
* The unit the matched marker is tracked in; null for a marker that does not
* exist yet. A numeric row whose `unit` differs from it cannot be saved.
*/
markerUnit: string | null;
/** Non-null when the server flagged a likely duplicate of a live reading. */
duplicateOf: string | null;
/** Whether the row is selected for saving. Defaults false for duplicates. */
@@ -45,8 +52,18 @@ export function seedReviewRows(
takenAt: row.takenAt ?? fallbackDate,
confidence: row.confidence,
biomarkerMatch: row.biomarkerMatch,
markerUnit: row.markerUnit,
duplicateOf: row.duplicateOf,
// A flagged duplicate starts unchecked; everything else starts confirmed.
confirmed: row.duplicateOf === null,
// A flagged duplicate starts unchecked, and so does a reading in another
// unit than its marker's (it carries a badge saying why, and ticking it
// marks the unit field until it is fixed); everything else starts
// confirmed.
confirmed:
row.duplicateOf === null &&
!readingUnitDiffers({
valueText: row.valueText,
unit: row.unit,
markerUnit: row.markerUnit,
}),
}));
}
+23 -1
View File
@@ -7,10 +7,13 @@
* build the payload: it returns null exactly when `validateReviewRow` reports
* at least one field.
*/
import { sameLabUnit } from "@/lib/labs/unit-normalise";
import type { OcrReviewRow } from "./ocr-review-types";
import type { OcrCommitRowInput } from "./use-ocr-extract";
export type OcrRowField = "analyte" | "value" | "valueText" | "unit" | "date";
export type OcrRowField =
"analyte" | "value" | "valueText" | "unit" | "unitMismatch" | "date";
/** The fields of one row that block saving; empty when the row is writable. */
export type OcrRowErrors = Partial<Record<OcrRowField, true>>;
@@ -26,6 +29,23 @@ function isQualitativeRow(row: OcrReviewRow): boolean {
return row.valueText !== null && row.valueText !== undefined;
}
/**
* Whether a numeric reading states a unit other than the one its marker is
* tracked in. A qualitative reading has no unit, a new marker adopts the row's
* own, and a row with no unit yet is a different problem (`unit`), so none of
* those count. The same rule the commit applies when it skips such a row.
*/
export function readingUnitDiffers(row: {
valueText: string | null | undefined;
unit: string | null | undefined;
markerUnit: string | null | undefined;
}): boolean {
if (row.valueText !== null && row.valueText !== undefined) return false;
const stated = (row.unit ?? "").trim();
if (!row.markerUnit || !stated) return false;
return !sameLabUnit(stated, row.markerUnit);
}
export function validateReviewRow(row: OcrReviewRow): OcrRowErrors {
const errors: OcrRowErrors = {};
if (!row.analyte.trim()) errors.analyte = true;
@@ -36,6 +56,7 @@ export function validateReviewRow(row: OcrReviewRow): OcrRowErrors {
} else {
if (row.value === null || !Number.isFinite(row.value)) errors.value = true;
if (!(row.unit ?? "").trim()) errors.unit = true;
if (readingUnitDiffers(row)) errors.unitMismatch = true;
}
return errors;
}
@@ -59,6 +80,7 @@ export function toCommitRow(row: OcrReviewRow): OcrCommitRowInput | null {
if (row.value === null || !Number.isFinite(row.value)) return null;
const unit = (row.unit ?? "").trim();
if (!unit) return null;
if (readingUnitDiffers(row)) return null;
return {
analyte,
value: row.value,
+31 -4
View File
@@ -32,7 +32,7 @@ import { Label } from "@/components/ui/label";
import { useTranslations } from "@/lib/i18n/context";
import type { OcrReviewRow } from "./ocr-review-types";
import type { OcrRowErrors } from "./ocr-review-validation";
import { readingUnitDiffers, type OcrRowErrors } from "./ocr-review-validation";
/** Below this per-field confidence the field is flagged for a second look. */
const CONFIDENCE_THRESHOLD = 0.6;
@@ -65,10 +65,21 @@ export function OcrRowEditor({
"aria-describedby": `${fieldId}-${field}-error`,
}
: {};
const fieldError = (field: keyof OcrRowErrors, messageKey: string) =>
const fieldError = (
field: keyof OcrRowErrors,
messageKey: string,
params?: Record<string, string>,
) =>
errors?.[field] ? (
<FieldError id={`${fieldId}-${field}-error`} message={t(messageKey)} />
<FieldError
id={`${fieldId}-${field}-error`}
message={t(messageKey, params)}
/>
) : null;
// Stated before Save, not only after a failed attempt: a reading in another
// unit than its marker's cannot be written, and the person should see why
// the row is unticked (or will not save) while they are still reading it.
const unitDiffers = readingUnitDiffers(row);
const isQualitative = row.valueText !== null && row.valueText !== undefined;
const lowValueConfidence =
@@ -158,6 +169,17 @@ export function OcrRowEditor({
{t("labs.ocr.duplicateWarning")}
</Badge>
) : null}
{unitDiffers ? (
<Badge variant="secondary" className="max-w-full">
<Ruler aria-hidden />
<span className="truncate">
{t("labs.ocr.unitDiffersBadge", {
markerUnit: row.markerUnit ?? "",
unit: (row.unit ?? "").trim(),
})}
</span>
</Badge>
) : null}
{lowRowConfidence ? (
<Badge variant="secondary" className="text-muted-foreground">
<AlertCircle aria-hidden />
@@ -224,9 +246,14 @@ export function OcrRowEditor({
id={`${fieldId}-unit`}
value={row.unit ?? ""}
onChange={(e) => onChange({ ...row, unit: e.target.value })}
{...invalidProps("unit")}
{...invalidProps(
errors?.unitMismatch ? "unitMismatch" : "unit",
)}
/>
{fieldError("unit", "labs.ocr.errorUnit")}
{fieldError("unitMismatch", "labs.ocr.errorUnitMismatch", {
markerUnit: row.markerUnit ?? "",
})}
</div>
</>
)}